Streptococcus pneumoniae D39 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Streptococcus pneumoniae D39 RM systems
Ref: Lanie,J.A. et al. J. Bacteriol. 189 (1), 38-51 (2007)
REBASE ref # 9759
Complete sequence: 2,046,116 bp
GenBank #: CP000410 (NC_008533)
REBASE acronym: SpnD39
Org_num: 4547
All begin SPD_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 449 | 45 aa hypothetical protein | |||
| 451 | S | S3.SpnRIIIP (100% identity) | S1.SpnD39ORF454P | |
| 450 | S | S2.SpnRx1ORF2240P (100% identity) | S2.SpnD39ORF454P | |
| 452 | integrase/recombinase, phage integrase family | |||
| 453 | S | S1.SpnsD39aORF505P (100% identity) | CRAANNNNNNNNCTG | S3.SpnD39ORF454P |
| 454 | M | M.Sps7493ORF8970P (100% identity) | CRAANNNNNNNNCTG | M.SpnD39ORF454P |
| 455 | R | SpnsD39dORF9220P (100% identity) | CRAANNNNNNNNCTG | SpnD39ORF454P |
| 456 | 66 aa hypothetical protein | |||
| 781 | 388 aa hypothetical protein | |||
| 782 | M | M.SpnsD39dORF3010P (100% identity) | M.SpnD39ORF782P | |
| 783 | S | S.SpnRx1ORF3865P (100% identity) | S.SpnD39ORF782P | |
| 784 | R | SpnsD39dORF3010P (100% identity) | SpnD39ORF782P | |
| 785 | 66 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1078 | L-lactate dehydrogenase | |||
| 1079 | RM | SpnsD39dORF4855BP (100% identity) | SpnD39ORF1079AP | |
| 1080 | RM | SpnsD39dORF4855AP (100% identity) | SpnD39ORF1079BP | |
| 1081 | 84 aa hypothetical protein | |||
| 1258 | peptidase, U32 family protein | |||
| 1259 | R | SpnRx1ORF6295P (100% identity) | TCTAGA | SpnD39ORF1260P |
| 1260 | M | M.SpnsD39dORF4195P (100% identity) | TCTAGA | M.SpnD39ORF1260P |
| 1261 | 48 aa hypothetical protein | |||
| 1630 | 153 aa hypothetical protein | |||
| 1631 | R | SpnsD39dORF3910P (100% identity) | GATC | SpnD39ORF1631P |
| 1632 | 134 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1107 | guanosine monophosphate reductase | |||
| 1108 | R | SpnsD39dMcrCP (100% identity) | SpnD39McrCP | |
| 1109 | R | SpnsD39dMcrBP (100% identity) | SpnD39McrBP | |
| 1110 | 53 aa hypothetical protein | |||