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Putative Lactobacillus helveticus H10 RM systems
Ref: Zhang,H. et al. unpublished
REBASE ref # 12726
Sequence length: | GenBank #: | |
Chromosome: | 2,145,899 bp | CP002429 |
plasmid pH10: | 26,484 bp | CP002430 |
REBASE acronym: Lhe
Org_num: 6749
All begin LBHH_, LBHH_p
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
660 | pseudogene | |||
661 | R | Lke1207ORF10105P (97% identity) | LheORF662P | |
662 | M | M.LheLh12ORF3845P (98% identity) | M.LheORF662P | |
??? | S | S.LheDORF1480P (21% identity) | S.LheORF662P | |
663 | Transposase, IS4 family | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
51 | TetR family transcriptional regulator | |||
??? | R | LheLH99ORF40P (46% identity) | R1.LheORFAP | |
52 | pseudogene | |||
53 | Transposase ORF_B | |||
54 | Transposase, ISSmi4 | |||
??? | R | LplY21ORF230P (53% identity) | R2.LheORFAP | |
55 | uncharacterized protein | |||
945 | uncharacterized protein | |||
??? | M | M.LplY21ORF5075P (94% identity) | GATC | M.LheORFBP |
946 | Transposase | |||
1011 | uncharacterized protein | |||
1012 | RM | Lhe1004ORF12250P (77% identity) | LheORF1012P | |
1013 | uncharacterized protein | |||
plasmid pH10 | ||||
20 | Prophage Lp1 protein 65 | |||
21 | R | LmuLM011ORF8130P (68% identity) | LheORF23P | |
22 | C | C.YenpY1ORF18350P (48% identity) | C.LheORF23P | |
23 | M | M.LmuLM011ORF8130P (76% identity) | M.LheORF23P | |
24 | uncharacterized protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
79 | APC family amino acid-polyamine-organocation | |||
80 | R | Lhe18ORF400P (100% identity) | LheORF80P | |
81 | Penicillin-binding protein |