Escherichia coli SLDY13 |
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Putative Escherichia coli SLDY13 RM systems
Ref: Chen,R. unpublished
REBASE ref # 34284
| Sequence length: | GenBank #: | |
| Chromosome: | 4,827,067 bp | CP149967 |
| plasmid pSLDY13-1: | 116,513 bp | CP149968 |
REBASE acronym: EcoY13
Org_num: 76880
All begin WKR17_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2285 | 26 aa hypothetical protein | |||
| 2290 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoY13ORF2290P |
| 2295 | DNA-binding transcriptional regulator Fis | |||
| 9260 | phosphohydrolase | |||
| 9265 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoY13DcmP |
| 9270 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoY13DcmP |
| 9275 | drug/metabolite exporter YedA | |||
| 17945 | zinc ribbon domain-containing protein | |||
| 17950 | M | M.Ecos164ORF17830P (100% identity) | GGTACC | M.EcoY13ORF17950P |
| 17955 | integrase arm-type DNA-binding domain-containing | |||
| 19730 | HNH endonuclease | |||
| 19735 | R | Sso8ORF19860P (100% identity) | EcoY13ORF19735P | |
| 19740 | 55 aa hypothetical protein | |||
| plasmid pSLDY13-1 | ||||
| 23485 | 103 aa hypothetical protein | |||
| 23490 | M | M.KpnVA569ORF28145P (100% identity) | M.EcoY13ORF23490P | |
| 23495 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17860 | 97 aa hypothetical protein | |||
| 17865 | R | Ecos164ORF17750P (100% identity) | ACCACC | EcoY13ORF17870P |
| 17870 | M | M.Ecos164ORF17750P (100% identity) | ACCACC | M.EcoY13ORF17870P |
| 17875 | S8 family peptidase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17810 | zinc ribbon protein | |||
| 17815 | R | Ecos164McrBP (100% identity) | EcoY13McrBP | |
| 17820 | R | SflN97McrCP (100% identity) | EcoY13McrCP | |
| 17825 | DUF3387 domain-containing protein | |||