Escherichia coli EC600 |
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Putative Escherichia coli EC600 RM systems
Ref: Liu,H. unpublished
REBASE ref # 29250
Complete sequence: 4,600,994 bp
GenBank #: CP149794
REBASE acronym: EcoEC600
Org_num: 76875
All begin WKQ94_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19145 | adenine/cytosine-specific restriction | |||
| 19150 | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | EcoEC600ORF19155P |
| 19155 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoEC600ORF19155P |
| 19160 | S | S.EcoVir2ORF19035P (100% identity) | AACNNNNNNGTGC | S.EcoEC600ORF19155P |
| 19165 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1665 | cell division protein DamX | |||
| 1670 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoEC600DamP |
| 1675 | ribulose-phosphate 3-epimerase | |||
| 2295 | DUF2556 family protein | |||
| 2300 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoEC600ORF2300P |
| 2305 | DNA-binding transcriptional regulator Fis | |||
| 8830 | phosphohydrolase | |||
| 8835 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoEC600DcmP |
| 8840 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoEC600DcmP |
| 8845 | drug/metabolite exporter YedA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13065 | isocitrate/isopropylmalate family dehydrogenase | |||
| 13070 | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoEC600ORF13070P |
| 13075 | site-specific DNA recombinase | |||
| 19140 | GTPase | |||
| 19145 | R | SenHNK130MrrP (100% identity) | EcoEC600MrrP | |
| 19150 | type I restriction-modification system | |||