Escherichia coli Z1322PEC0232 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli Z1322PEC0232 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
Complete sequence: 4,715,200 bp
GenBank #: CP148527
REBASE acronym: EcoC0232
Org_num: 76881
All begin WHU24_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11970 | 84 aa hypothetical protein | |||
| 11975 | R | EcoS10AORF23300P (45% identity) | EcoC0232ORF11985P | |
| 11980 | 465 aa hypothetical protein | |||
| 11985 | M | M.Eco193BORFBP (99% identity) | M.EcoC0232ORF11985P | |
| 11990 | S | S.Eco193BORFBP (99% identity) | S.EcoC0232ORF11985P | |
| 11995 | 156 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3770 | phosphohydrolase | |||
| 3775 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoC0232DcmP |
| 3780 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC0232DcmP |
| 3785 | drug/metabolite exporter YedA | |||
| 14315 | HNH endonuclease | |||
| 14320 | R | EcoEC12ORF11420P (100% identity) | EcoC0232ORF14320P | |
| 14325 | integrase core domain-containing protein | |||
| 14340 | phospholipase D family protein | |||
| 14345 | M | M.SmaE38ORF46350P (17% identity) | M1.EcoC0232ORF14345P | |
| 14350 | M | M.EcoSC477ORFDP (81% identity) | M2.EcoC0232ORF14345P | |
| 14355 | integrase | |||
| 19395 | cell division protein DamX | |||
| 19400 | M | M.Eco707DamP (100% identity) | GATC | M.EcoC0232DamP |
| 19405 | ribulose-phosphate 3-epimerase | |||
| 19920 | DUF2556 family protein | |||
| 19925 | M | M.EcoEC12ORF17530P (100% identity) | ATGCAT | M.EcoC0232ORF19925P |
| 19930 | DNA-binding transcriptional regulator Fis | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14065 | 34 aa hypothetical protein | |||
| 14070 | R | EcoTa3MrrP (100% identity) | EcoC0232MrrP | |
| 14075 | type I restriction-modification system subunit M | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8435 | NinE family protein | |||
| 8440 | M | M.SflN97ORF8425P (100% identity) | GATC | M.EcoC0232ORF8440P |
| 8445 | recombination protein NinB | |||