Escherichia coli Z1323PEC0006 |
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Putative Escherichia coli Z1323PEC0006 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
| Sequence length: | GenBank #: | |
| Chromosome: | 5,291,872 bp | CP148297 |
| plasmid pZ1323PEC0006-2: | 99,895 bp | CP148298 |
REBASE acronym: EcoPEC0006
Org_num: 76907
All begin WHU36_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1480 | IS3 family transposase | |||
| 1485 | M | M.SenSI167ORF3215P (99% identity) | M.EcoPEC0006ORF1485P | |
| 1490 | S | S.EcoC0006ORF6015P (100% identity) | S.EcoPEC0006ORF1485P | |
| 1495 | DUF4268 domain-containing protein | |||
| 1500 | R | SflSTLE3ORF22785P (99% identity) | EcoPEC0006ORF1485P | |
| 1505 | IS3 family transposase | |||
| 14590 | GTPase family protein | |||
| 14595 | M | M.EcoC0003ORF5490P (100% identity) | CACNNNNNNTCC | M.EcoPEC0006ORF14595P |
| 14600 | S | S.Sen1467ORF14775P (99% identity) | CACNNNNNNTCC | S.EcoPEC0006ORF14595P |
| 14605 | R | EcoC0003ORF5490P (100% identity) | CACNNNNNNTCC | EcoPEC0006ORF14595P |
| 14610 | 63 aa hypothetical protein | |||
| 15545 | AAA family ATPase | |||
| 15550 | S | S.Eco87ORF17365P (100% identity) | CGANNNNNNNNNTGAG | S.EcoPEC0006ORF15555P |
| 15555 | M | M.KpnMcsORF17330P (100% identity) | CGANNNNNNNNNTGAG | M.EcoPEC0006ORF15555P |
| 15560 | type I restriction-modification enzyme R subunit | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5175 | DNA-binding transcriptional regulator Fis | |||
| 5180 | M | M.EcotcmA3ORF12410P (100% identity) | ATGCAT | M.EcoPEC0006ORF5180P |
| 5185 | DUF2556 family protein | |||
| 5730 | ribulose-phosphate 3-epimerase | |||
| 5735 | M | M.EcoMEC0003DamP (99% identity) | GATC | M.EcoPEC0006DamP |
| 5740 | cell division protein DamX | |||
| 9405 | PerC family transcriptional regulator | |||
| 9410 | M | M.SflN101ORF11410P (100% identity) | GATC | M.EcoPEC0006ORF9410P |
| 9415 | LexA family transcriptional regulator | |||
| 10840 | BREX-1 system phosphatase PglZ type A | |||
| 10845 | RM | EcoV02ORF19915P (100% identity) | EcoPEC0006ORF10845P | |
| 10850 | BREX system P-loop protein BrxC | |||
| 10865 | 332 aa hypothetical protein | |||
| 10870 | R | Ecostr10ORF18645P (100% identity) | EcoPEC0006ORF10870P | |
| 10875 | HNH endonuclease | |||
| 18730 | phosphohydrolase | |||
| 18735 | M | M.Eco87DcmP (100% identity) | CCWGG | M.EcoPEC0006DcmP |
| 18740 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoPEC0006DcmP |
| 18745 | drug/metabolite exporter YedA | |||
| 19095 | 71 aa hypothetical protein | |||
| 19100 | M | M.KaeCRE8ORF15605P (100% identity) | M.EcoPEC0006ORF19100P | |
| 19105 | helix-turn-helix domain-containing protein | |||
| 21160 | TrmB family transcriptional regulator | |||
| 21165 | M | M.EcoW12E19ORF4775P (95% identity) | A | M.EcoPEC0006ORF21165P |
| 21185 | 39 aa hypothetical protein | |||
| 26235 | NinE family protein | |||
| 26240 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoPEC0006ORF26240P |
| 26245 | recombination protein NinB | |||
| plasmid pZ1323PEC0006-2 | ||||
| 26835 | 103 aa hypothetical protein | |||
| 26840 | M | M.SenSE36NORF22215P (100% identity) | M.EcoPEC0006ORF26840P | |
| 26845 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23500 | isocitrate/isopropylmalate family dehydrogenase | |||
| 23505 | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoPEC0006ORF23505P |
| 23510 | site-specific DNA recombinase | |||