Escherichia coli Z1322PEC0187 |
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Putative Escherichia coli Z1322PEC0187 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
| Sequence length: | GenBank #: | |
| Chromosome: | 5,002,938 bp | CP148535 |
| plasmid pZ1322PEC0187-3: | 90,928 bp | CP148537 |
| plasmid pZ1322PEC0187-4: | 75,346 bp | CP148538 |
REBASE acronym: Eco87
Org_num: 76652
All begin WHU66_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1750 | IS66 family transposase | |||
| 1755 | R | EmaC12ORF18910P (99% identity) | GAACNNNNNTGC | Eco87ORF1760P |
| 1760 | M | M.Eco0188ORF5715P (100% identity) | GAACNNNNNTGC | M.Eco87ORF1760P |
| 1765 | S | S.SflN101ORF19075P (100% identity) | GAACNNNNNTGC | S.Eco87ORF1760P |
| 1770 | transposase domain-containing protein | |||
| 17360 | type I restriction-modification enzyme R subunit | |||
| 17365 | M | M.KpnMcsORF17330P (100% identity) | CGANNNNNNNNNTGAG | M.Eco87ORF17365P |
| 17370 | S | S.EcoPEC0006ORF15555P (100% identity) | CGANNNNNNNNNTGAG | S.Eco87ORF17365P |
| 17375 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2550 | BREX-1 system phosphatase PglZ type A | |||
| 2555 | RM | EcoV02ORF19915P (99% identity) | Eco87ORF2555P | |
| 2560 | BREX system P-loop protein BrxC | |||
| 2575 | 332 aa hypothetical protein | |||
| 2580 | R | Ecostr10ORF18645P (100% identity) | Eco87ORF2580P | |
| 2585 | HNH endonuclease | |||
| 7240 | recombination protein NinB | |||
| 7245 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco87ORF7245P |
| 7250 | NinE family protein | |||
| 13900 | drug/metabolite exporter YedA | |||
| 13905 | V | V.Eco0188DcmP (100% identity) | V.Eco87DcmP | |
| 13910 | M | M.EcoPEC0006DcmP (100% identity) | CCWGG | M.Eco87DcmP |
| 13915 | phosphohydrolase | |||
| 14170 | 39 aa hypothetical protein | |||
| 14190 | M | M.SboBSORF1444P (100% identity) | A | M.Eco87ORF14190P |
| 14195 | TrmB family transcriptional regulator | |||
| 14950 | NinE family protein | |||
| 14955 | M | M.SflN97ORF15810P (100% identity) | GATC | M.Eco87ORF14955P |
| 14960 | recombination protein NinB | |||
| 21570 | DNA-binding transcriptional regulator Fis | |||
| 21575 | M | M.EcotcmA3ORF12410P (100% identity) | ATGCAT | M.Eco87ORF21575P |
| 21580 | DUF2556 family protein | |||
| 22125 | ribulose-phosphate 3-epimerase | |||
| 22130 | M | M.Eco27C09DamP (99% identity) | GATC | M.Eco87DamP |
| 22135 | cell division protein DamX | |||
| plasmid pZ1322PEC0187-3 | ||||
| 25895 | 101 aa hypothetical protein | |||
| 25900 | M | M.EcoEC0008ORF25400P (98% identity) | M.Eco87ORF25900P | |
| 25905 | 73 aa hypothetical protein | |||
| plasmid pZ1322PEC0187-4 | ||||
| 26295 | 103 aa hypothetical protein | |||
| 26300 | M | M.Eho4ORF23420P (100% identity) | M.Eco87ORF26300P | |
| 26305 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9990 | site-specific DNA recombinase | |||
| 9995 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco87ORF9995P |
| 10000 | isocitrate/isopropylmalate family dehydrogenase | |||