Escherichia coli Z1322PEC0188 |
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Putative Escherichia coli Z1322PEC0188 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
| Sequence length: | GenBank #: | |
| Chromosome: | 5,002,116 bp | CP148531 |
| plasmid pZ1322PEC0188-3: | 90,933 bp | CP148533 |
| plasmid pZ1322PEC0188-4: | 75,357 bp | CP148534 |
REBASE acronym: Eco0188
Org_num: 76651
All begin WHU18_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5705 | transposase domain-containing protein | |||
| 5710 | S | S.SflN101ORF19075P (100% identity) | GAACNNNNNTGC | S.Eco0188ORF5715P |
| 5715 | M | M.Eco87ORF1760P (100% identity) | GAACNNNNNTGC | M.Eco0188ORF5715P |
| 5720 | R | EmaC12ORF18910P (89% identity) | GAACNNNNNTGC | Eco0188ORF5715P |
| 5725 | IS66 family transposase | |||
| 14740 | AAA family ATPase | |||
| 14745 | S | S.EcoPEC0006ORF15555P (100% identity) | CGANNNNNNNNNTGAG | S.Eco0188ORF14750P |
| 14750 | M | M.KpnMcsORF17330P (100% identity) | CGANNNNNNNNNTGAG | M.Eco0188ORF14750P |
| 14755 | type I restriction-modification enzyme R subunit | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 215 | NinE family protein | |||
| 220 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco0188ORF220P |
| 225 | recombination protein NinB | |||
| 4890 | HNH endonuclease | |||
| 4895 | R | Ecostr10ORF18645P (100% identity) | Eco0188ORF4895P | |
| 4900 | 332 aa hypothetical protein | |||
| 4915 | BREX system P-loop protein BrxC | |||
| 4920 | RM | EcoV02ORF19915P (99% identity) | Eco0188ORF4920P | |
| 4925 | BREX-1 system phosphatase PglZ type A | |||
| 9960 | cell division protein DamX | |||
| 9965 | M | M.Eco47076DamP (100% identity) | GATC | M.Eco0188DamP |
| 9970 | ribulose-phosphate 3-epimerase | |||
| 10515 | DUF2556 family protein | |||
| 10520 | M | M.EcoEC0007ORF22530P (99% identity) | ATGCAT | M.Eco0188ORF10520P |
| 10525 | DNA-binding transcriptional regulator Fis | |||
| 17145 | recombination protein NinB | |||
| 17150 | M | M.SflN97ORF15810P (100% identity) | GATC | M.Eco0188ORF17150P |
| 17155 | NinE family protein | |||
| 17910 | TrmB family transcriptional regulator | |||
| 17915 | M | M.SboBSORF1444P (100% identity) | A | M.Eco0188ORF17915P |
| 17935 | 39 aa hypothetical protein | |||
| 18190 | phosphohydrolase | |||
| 18195 | M | M.EcoPEC0006DcmP (100% identity) | CCWGG | M.Eco0188DcmP |
| 18200 | V | V.Eco87DcmP (100% identity) | V.Eco0188DcmP | |
| 18205 | drug/metabolite exporter YedA | |||
| plasmid pZ1322PEC0188-3 | ||||
| 25650 | 73 aa hypothetical protein | |||
| 25655 | M | M.EcoEC0008ORF25400P (100% identity) | M.Eco0188ORF25655P | |
| 25660 | 101 aa hypothetical protein | |||
| plasmid pZ1322PEC0188-4 | ||||
| 26110 | 73 aa hypothetical protein | |||
| 26115 | M | M.Eho4ORF23420P (100% identity) | M.Eco0188ORF26115P | |
| 26120 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22095 | isocitrate/isopropylmalate family dehydrogenase | |||
| 22100 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco0188ORF22100P |
| 22105 | site-specific DNA recombinase | |||