Escherichia coli Z1323CEC0006 |
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Putative Escherichia coli Z1323CEC0006 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
| Sequence length: | GenBank #: | |
| Chromosome: | 5,486,274 bp | CP148466 |
| plasmid pZ1323CEC0006-2: | 106,456 bp | CP148467 |
| plasmid pZ1323CEC0006-3: | 98,504 bp | CP148468 |
| plasmid pZ1323CEC0006-4: | 8,214 bp | CP148469 |
REBASE acronym: EcoC0006
Org_num: 76642
All begin WHU46_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5995 | IS3 family transposase | |||
| 6000 | R | SflSTLE3ORF22785P (100% identity) | EcoC0006ORF6015P | |
| 6005 | DUF4268 domain-containing protein | |||
| 6010 | S | S.EcoPEC0006ORF1485P (100% identity) | S.EcoC0006ORF6015P | |
| 6015 | M | M.SenSI167ORF3215P (100% identity) | M.EcoC0006ORF6015P | |
| 6020 | IS3 family transposase | |||
| 10225 | IS66 family transposase | |||
| 10230 | S | S2.EcoUM1886ORF17525P (100% identity) | S2.EcoC0006ORF10255P | |
| 10235 | R | EcoUM1886ORF17525P (100% identity) | EcoC0006ORF10255P | |
| 10240 | toxin-antitoxin system antitoxin DNA ADP-ribosyl | |||
| 10245 | toxin-antitoxin system toxin DNA ADP-ribosyl | |||
| 10250 | S | S1.EcoUM1886ORF17525P (99% identity) | YTCANNNNNNGTNG | S1.EcoC0006ORF10255P |
| 10255 | M | M.EcoW14588ORF21505P (100% identity) | M.EcoC0006ORF10255P | |
| 10260 | 58 aa hypothetical protein | |||
| 15690 | SprT family zinc-dependent metalloprotease | |||
| 15695 | R | EcoPK8241ORF9245P (100% identity) | EcoC0006ORF15710P | |
| 15700 | YecA family protein | |||
| 15705 | S | S.EcoPK8241ORF9245P (100% identity) | S.EcoC0006ORF15710P | |
| 15710 | M | M.Ero309ORF14810P (100% identity) | M.EcoC0006ORF15710P | |
| 15715 | 390 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1715 | cell division protein DamX | |||
| 1720 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC0006DamP |
| 1725 | ribulose-phosphate 3-epimerase | |||
| 2350 | DUF2556 family protein | |||
| 2355 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoC0006ORF2355P |
| 2360 | DNA-binding transcriptional regulator Fis | |||
| 4005 | BREX-1 system phosphatase PglZ type A | |||
| 4010 | RM | EcoP19598ORF21290P (100% identity) | EcoC0006ORF4010P | |
| 4015 | BREX system P-loop protein BrxC | |||
| 9050 | recombination protein NinB | |||
| 9055 | M | M.SflN97ORF15810P (100% identity) | GATC | M.EcoC0006ORF9055P |
| 9060 | NinE family protein | |||
| 10965 | TrmB family transcriptional regulator | |||
| 10970 | M | M.EcoPK8241ORF4525P (100% identity) | M.EcoC0006ORF10970P | |
| 10975 | class II holin family protein | |||
| 16040 | drug/metabolite exporter YedA | |||
| 16045 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoC0006DcmP |
| 16050 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoC0006DcmP |
| 16055 | phosphohydrolase | |||
| 16315 | 39 aa hypothetical protein | |||
| 16335 | M | M.EcoS7005ORFLP (100% identity) | M.EcoC0006ORF16335P | |
| 16340 | TrmB family transcriptional regulator | |||
| 17405 | class II holin family protein | |||
| 17410 | M | M.EcoPK8241ORF4525P (100% identity) | M.EcoC0006ORF17410P | |
| 17415 | TrmB family transcriptional regulator | |||
| 19185 | NinE family protein | |||
| 19190 | M | M.EcoS7380ORFIP (94% identity) | GATC | M.EcoC0006ORF19190P |
| 19195 | recombination protein NinB | |||
| 21620 | class II holin family protein | |||
| 21625 | M | M.EcoPK8241ORF4525P (100% identity) | M.EcoC0006ORF21625P | |
| 21630 | TrmB family transcriptional regulator | |||
| 21665 | NinE family protein | |||
| 21670 | M | M.EcoEC0005ORF15625P (100% identity) | M.EcoC0006ORF21670P | |
| 21675 | HNH endonuclease | |||
| 25825 | NinE family protein | |||
| 25830 | M | M.EcoEC0016ORF9665P (100% identity) | GATC | M.EcoC0006ORF25830P |
| 25835 | recombination protein NinB | |||
| plasmid pZ1323CEC0006-2 | ||||
| 28275 | ead/Ea22-like family protein | |||
| 28280 | M | M.EcoPK8241ORF24805P (100% identity) | M.EcoC0006ORF28280P | |
| 28285 | 86 aa hypothetical protein | |||
| plasmid pZ1323CEC0006-3 | ||||
| 28610 | 103 aa hypothetical protein | |||
| 28615 | M | M.Eho4ORF23420P (100% identity) | M.EcoC0006ORF28615P | |
| 28620 | 73 aa hypothetical protein | |||
| plasmid pZ1323CEC0006-4 | ||||
| 29080 | M | M.EcoEC0005ORF29010P (100% identity) | CCNGG | M.EcoC0006ORF29080P |
| 29085 | MbeD family mobilization/exclusion protein | |||
| 29090 | MbeB family mobilization protein | |||
| 29095 | relaxase/mobilization nuclease domain-containing | |||
| 29100 | MobC family plasmid mobilization relaxosome | |||
| 29105 | Rop family plasmid primer RNA-binding protein | |||
| 29110 | replication initiation protein | |||
| 29115 | 72 aa hypothetical protein | |||
| 29120 | IS21 family transposase | |||
| 29125 | IS21-like element ISSso4 family helper ATPase | |||
| 29075 | R | EcoEC0005ORF29010P (100% identity) | CCNGG | EcoC0006ORF29080P |