Escherichia coli Z1323CEC0016 |
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Putative Escherichia coli Z1323CEC0016 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
| Sequence length: | GenBank #: | |
| Chromosome: | 5,444,797 bp | CP148416 |
| plasmid pZ1323CEC0016-2: | 101,231 bp | CP148417 |
| plasmid pZ1323CEC0016-3: | 93,084 bp | CP148418 |
REBASE acronym: EcoEC0016
Org_num: 76632
All begin WHU65_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3375 | 63 aa hypothetical protein | |||
| 3380 | R | EcoCEC0001ORF3370P (100% identity) | EcoEC0016ORF3390P | |
| 3385 | S | S.EcoCEC0001ORF3370P (100% identity) | S.EcoEC0016ORF3390P | |
| 3390 | M | M.EcoCEC0001ORF3370P (99% identity) | M.EcoEC0016ORF3390P | |
| 3395 | GTPase family protein | |||
| 10270 | M | M.Sen64034II (100% identity) | AGCNNNNNCTTC | M.EcoEC0016ORF10270P |
| 10275 | S | S.Sen64034II (100% identity) | AGCNNNNNCTTC | S.EcoEC0016ORF10270P |
| 10280 | restriction system-associated AAA family ATPase | |||
| 11215 | 410 aa hypothetical protein | |||
| 11220 | M | M.Ero309ORF14810P (100% identity) | M.EcoEC0016ORF11220P | |
| 11225 | S | S.EcoPK8241ORF9245P (100% identity) | S.EcoEC0016ORF11220P | |
| 11230 | YecA family protein | |||
| 11235 | R | EcoPK8241ORF9245P (100% identity) | EcoEC0016ORF11220P | |
| 11240 | SprT family zinc-dependent metalloprotease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1690 | cell division protein DamX | |||
| 1695 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoEC0016DamP |
| 1700 | ribulose-phosphate 3-epimerase | |||
| 2325 | DUF2556 family protein | |||
| 2330 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoEC0016ORF2330P |
| 2335 | DNA-binding transcriptional regulator Fis | |||
| 7185 | HNH endonuclease | |||
| 7190 | M | M.EcoEC0016ORF17395P (100% identity) | M.EcoEC0016ORF7190P | |
| 7195 | NinE family protein | |||
| 8970 | recombination protein NinB | |||
| 8975 | M | M.SflN97ORF15810P (100% identity) | GATC | M.EcoEC0016ORF8975P |
| 8980 | NinE family protein | |||
| 9660 | recombination protein NinB | |||
| 9665 | M | M.EcoEC0005ORF11430P (100% identity) | GATC | M.EcoEC0016ORF9665P |
| 9670 | NinE family protein | |||
| 10635 | TrmB family transcriptional regulator | |||
| 10640 | M | M.EcoS7005ORFLP (100% identity) | M.EcoEC0016ORF10640P | |
| 10660 | 39 aa hypothetical protein | |||
| 10905 | phosphohydrolase | |||
| 10910 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoEC0016DcmP |
| 10915 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoEC0016DcmP |
| 10920 | drug/metabolite exporter YedA | |||
| 16040 | phage lysis protein EssD | |||
| 16045 | M | M.EcoC0004ORF15940P (100% identity) | M.EcoEC0016ORF16045P | |
| 16050 | TrmB family transcriptional regulator | |||
| 17390 | NinE family protein | |||
| 17395 | M | M.EcoEC0016ORF7190P (100% identity) | M.EcoEC0016ORF17395P | |
| 17400 | HNH endonuclease | |||
| 17875 | class II holin family protein | |||
| 17900 | M | M.EcoPK8241ORF3025P (100% identity) | M.EcoEC0016ORF17900P | |
| 17905 | TrmB family transcriptional regulator | |||
| 19300 | NinE family protein | |||
| 19305 | M | M.EcoCEC0001ORF19240P (100% identity) | GATC | M.EcoEC0016ORF19305P |
| 19310 | recombination protein NinB | |||
| plasmid pZ1323CEC0016-3 | ||||
| 28605 | 103 aa hypothetical protein | |||
| 28610 | M | M.Eho4ORF23420P (100% identity) | M.EcoEC0016ORF28610P | |
| 28615 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pZ1323CEC0016-2 | ||||
| 28080 | modulator protein | |||
| 28085 | M | M.SenSL0052ORF25975P (100% identity) | AGACC | M.EcoEC0016ORF28085P |
| 28090 | R | SenSL0052ORF25975P (100% identity) | AGACC | EcoEC0016ORF28085P |
| 28095 | maturation control protein | |||