Escherichia coli Z1323HEC0009 |
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Putative Escherichia coli Z1323HEC0009 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
| Sequence length: | GenBank #: | |
| Chromosome: | 4,767,769 bp | CP148398 |
| plasmid pZ1323HEC0009-3: | 55,211 bp | CP148400 |
REBASE acronym: Eco009
Org_num: 76628
All begin WHU60_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17855 | helix-turn-helix transcriptional regulator | |||
| 17860 | M | M1.EcoC0001ORF17855P (100% identity) | M1.Eco009ORF17860P | |
| 17865 | M | M2.EcoC0010ORF8995P (100% identity) | M2.Eco009ORF17860P | |
| 17870 | S | S.EcoC0001ORF17855P (100% identity) | S.Eco009ORF17860P | |
| 17875 | R | EcoC0010ORF8995P (100% identity) | Eco009ORF17860P | |
| 17880 | IS110 family transposase | |||
| 17995 | 677 aa hypothetical protein | |||
| 18000 | R | Ecos4422ORF22930P (100% identity) | CYAYNNNNNNNTTAC | Eco009ORF18010P |
| 18005 | S | S.EcoDEC15BORF5167P (100% identity) | CYAYNNNNNNNTTAC | S.Eco009ORF18010P |
| 18010 | M | M.Ecos4422ORF22930P (100% identity) | CYAYNNNNNNNTTAC | M.Eco009ORF18010P |
| 18015 | DUF4942 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5555 | drug/metabolite exporter YedA | |||
| 5560 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco009DcmP |
| 5565 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco009DcmP |
| 5570 | phosphohydrolase | |||
| 12610 | DNA-binding transcriptional regulator Fis | |||
| 12615 | M | M.EcotcmA3ORF12410P (100% identity) | ATGCAT | M.Eco009ORF12615P |
| 12620 | DUF2556 family protein | |||
| 18460 | PerC family transcriptional regulator | |||
| 18465 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco009ORF18465P |
| 18470 | LexA family transcriptional regulator | |||
| 22735 | recombination protein NinB | |||
| 22740 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco009ORF22740P |
| 22745 | NinE family protein | |||
| plasmid pZ1323HEC0009-3 | ||||
| 23760 | replication endonuclease | |||
| 23765 | M | M.EcoR8ORF17785P (100% identity) | GATC | M.Eco009ORF23765P |
| 23770 | TraR/DksA family transcriptional regulator | |||