Escherichia coli Z1322HEC0005 |
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Putative Escherichia coli Z1322HEC0005 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
Complete sequence: 5,002,682 bp
GenBank #: CP148578
REBASE acronym: EcoHEC0005
Org_num: 76744
All begin WHU22_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11950 | DUF262 domain-containing HNH endonuclease family | |||
| 11955 | R | Eco974ORF11025P (100% identity) | EcoHEC0005ORF11960P | |
| 11960 | M | M.Eco974ORF11025P (100% identity) | M.EcoHEC0005ORF11960P | |
| 11965 | S | S.Eco974ORF11025P (100% identity) | S.EcoHEC0005ORF11960P | |
| 11970 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 760 | phosphohydrolase | |||
| 765 | M | M.Eco8E3C08DcmP (100% identity) | CCWGG | M.EcoHEC0005DcmP |
| 770 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoHEC0005DcmP |
| 775 | drug/metabolite exporter YedA | |||
| 2800 | DUF977 family protein | |||
| 2805 | M | M.EcosC41ORF15185P (100% identity) | M.EcoHEC0005ORF2805P | |
| 2810 | 60 aa hypothetical protein | |||
| 12185 | RM | EcoT33ORF2295P (98% identity) | GAAANTC | EcoHEC0005ORF12185P |
| 12190 | DEAD/DEAH box helicase | |||
| 12220 | N-acetylneuraminic acid mutarotase | |||
| 12225 | R | EcoRG065ORF11765P (100% identity) | EcoHEC0005ORF12225P | |
| 12230 | peptidase | |||
| 17860 | DUF2556 family protein | |||
| 17865 | M | M.SdyFF51ORF20390P (100% identity) | ATGCAT | M.EcoHEC0005ORF17865P |
| 17870 | DNA-binding transcriptional regulator Fis | |||
| 21165 | TraR/DksA family transcriptional regulator | |||
| 21170 | M | M.Sen6004ORF13105P (100% identity) | GATC | M.EcoHEC0005ORF21170P |
| 21175 | replication endonuclease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11970 | endoribonuclease SymE | |||
| ??? | R | Eco11111GmrSDP (99% identity) | EcoHEC0005GmrSDP | |
| 11985 | cytoplasmic protein | |||