Escherichia coli Z1323CEC0001 |
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Putative Escherichia coli Z1323CEC0001 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
| Sequence length: | GenBank #: | |
| Chromosome: | 5,424,804 bp | CP148507 |
| plasmid pZ1323CEC0001-2: | 119,059 bp | CP148508 |
| plasmid pZ1323CEC0001-3: | 77,526 bp | CP148509 |
| plasmid pZ1323CEC0001-5: | 5,270 bp | CP148511 |
REBASE acronym: EcoCEC0001
Org_num: 76647
All begin WHU28_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3355 | 63 aa hypothetical protein | |||
| 3360 | R | EcoEC0016ORF3390P (100% identity) | EcoCEC0001ORF3370P | |
| 3365 | S | S.EcoEC0016ORF3390P (100% identity) | S.EcoCEC0001ORF3370P | |
| 3370 | M | M.EcoC0009ORF3365P (100% identity) | M.EcoCEC0001ORF3370P | |
| 3375 | GTPase family protein | |||
| 10235 | M | M.Sen64034II (100% identity) | AGCNNNNNCTTC | M.EcoCEC0001ORF10235P |
| 10240 | S | S.Sen64034II (100% identity) | AGCNNNNNCTTC | S.EcoCEC0001ORF10235P |
| 10245 | restriction system-associated AAA family ATPase | |||
| 11180 | 410 aa hypothetical protein | |||
| 11185 | M | M.Ero309ORF14810P (100% identity) | M.EcoCEC0001ORF11185P | |
| 11190 | S | S.EcoPK8241ORF9245P (100% identity) | S.EcoCEC0001ORF11185P | |
| 11195 | YecA family protein | |||
| 11200 | R | EcoPK8241ORF9245P (100% identity) | EcoCEC0001ORF11185P | |
| 11205 | SprT family zinc-dependent metalloprotease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1695 | cell division protein DamX | |||
| 1700 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoCEC0001DamP |
| 1705 | ribulose-phosphate 3-epimerase | |||
| 2330 | DUF2556 family protein | |||
| 2335 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoCEC0001ORF2335P |
| 2340 | DNA-binding transcriptional regulator Fis | |||
| 7170 | HNH endonuclease | |||
| 7175 | M | M.EcoEC0016ORF7190P (100% identity) | M.EcoCEC0001ORF7175P | |
| 7180 | NinE family protein | |||
| 8960 | recombination protein NinB | |||
| 8965 | M | M.EcoCEC0001ORF9655P (100% identity) | GATC | M.EcoCEC0001ORF8965P |
| 8970 | NinE family protein | |||
| 9650 | recombination protein NinB | |||
| 9655 | M | M.EcoCEC0001ORF8965P (100% identity) | GATC | M.EcoCEC0001ORF9655P |
| 9660 | NinE family protein | |||
| 10600 | TrmB family transcriptional regulator | |||
| 10605 | M | M.EcoS7005ORFLP (100% identity) | M.EcoCEC0001ORF10605P | |
| 10625 | 39 aa hypothetical protein | |||
| 10870 | phosphohydrolase | |||
| 10875 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoCEC0001DcmP |
| 10880 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoCEC0001DcmP |
| 10885 | drug/metabolite exporter YedA | |||
| 16045 | class II holin family protein | |||
| 16050 | M | M.EcoCEC0001ORF17785P (100% identity) | M.EcoCEC0001ORF16050P | |
| 16055 | TrmB family transcriptional regulator | |||
| 17780 | class II holin family protein | |||
| 17785 | M | M.EcoCEC0001ORF16050P (100% identity) | M.EcoCEC0001ORF17785P | |
| 17790 | TrmB family transcriptional regulator | |||
| 19235 | NinE family protein | |||
| 19240 | M | M.EcoEC0016ORF19305P (100% identity) | GATC | M.EcoCEC0001ORF19240P |
| 19245 | recombination protein NinB | |||
| plasmid pZ1323CEC0001-2 | ||||
| 28255 | ead/Ea22-like family protein | |||
| 28260 | M | M.EcoPK8241ORF24805P (100% identity) | M.EcoCEC0001ORF28260P | |
| 28265 | 86 aa hypothetical protein | |||
| 28375 | RNA-guided endonuclease TnpB family protein | |||
| 28380 | M | M.EcoPK8241ORF24920P (100% identity) | M.EcoCEC0001ORF28380P | |
| 28385 | recombination-associated protein RdgC | |||
| plasmid pZ1323CEC0001-3 | ||||
| 28535 | 103 aa hypothetical protein | |||
| 28540 | M | M.Eho4ORF23420P (100% identity) | M.EcoCEC0001ORF28540P | |
| 28545 | 73 aa hypothetical protein | |||
| plasmid pZ1323CEC0001-5 | ||||
| 28995 | MbeD family mobilization/exclusion protein | |||
| 29000 | R | SenpCI (100% identity) | CCGCGG | EcoCEC0001ORF29005P |
| 29005 | M | M.SenpCI (100% identity) | CCGCGG | M.EcoCEC0001ORF29005P |