Escherichia coli Z1322PEC0147 |
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Putative Escherichia coli Z1322PEC0147 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
| Sequence length: | GenBank #: | |
| Chromosome: | 5,347,749 bp | CP148544 |
| plasmid pZ1322PEC0147-2: | 66,024 bp | CP148545 |
REBASE acronym: EcoC0147
Org_num: 76654
All begin WHU76_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20975 | endoribonuclease SymE | |||
| 20980 | S | S.EcoTB182AORF22480P (99% identity) | CACNNNNNNNCTGG | S.EcoC0147ORF20985P |
| 20985 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoC0147ORF20985P |
| 20990 | R | EcoTB182AORF22480P (100% identity) | CACNNNNNNNCTGG | EcoC0147ORF20985P |
| 20995 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6670 | drug/metabolite exporter YedA | |||
| 6675 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.EcoC0147DcmP |
| 6680 | M | M.EcoTB182ADcmP (100% identity) | CCWGG | M.EcoC0147DcmP |
| 6685 | phosphohydrolase | |||
| 7270 | 39 aa hypothetical protein | |||
| 7290 | M | M.EcoDEC5BORF2703P (100% identity) | A | M.EcoC0147ORF7290P |
| 7295 | TrmB family transcriptional regulator | |||
| 14735 | DNA-binding transcriptional regulator Fis | |||
| 14740 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoC0147ORF14740P |
| 14745 | DUF2556 family protein | |||
| 15250 | ribulose-phosphate 3-epimerase | |||
| 15255 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC0147DamP |
| 15260 | cell division protein DamX | |||
| 20755 | DEAD/DEAH box helicase | |||
| 20760 | RM | EcoCB9615ORF5106P (100% identity) | GAAABCC | EcoC0147ORF20760P |
| 22810 | recombination protein NinB | |||
| 22815 | M | M.EcoTB182AORF20675P (100% identity) | GATC | M.EcoC0147ORF22815P |
| 22820 | NinE family protein | |||
| plasmid pZ1322PEC0147-2 | ||||
| 26435 | 101 aa hypothetical protein | |||
| 26440 | M | M.EcoTB182AORF25840P (99% identity) | M.EcoC0147ORF26440P | |
| 26445 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20960 | DUF1127 domain-containing protein | |||
| 20965 | R | SflLIN8GmrSDP (42% identity) | EcoC0147GmrSP | |
| 20970 | R | EcoS946GmrDP (100% identity) | EcoC0147GmrDP | |
| 20975 | endoribonuclease SymE | |||