Escherichia coli Z1322PEC0134 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli Z1322PEC0134 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
| Sequence length: | GenBank #: | |
| Chromosome: | 5,010,531 bp | CP148546 |
| plasmid pZ1322PEC0134-2: | 119,353 bp | CP148547 |
| plasmid pZ1322PEC0134-3: | 93,323 bp | CP148548 |
| plasmid pZ1322PEC0134-4: | 80,302 bp | CP148549 |
REBASE acronym: Eco0134
Org_num: 76655
All begin WHU11_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2690 | integrase | |||
| 2695 | R | SflFF24DptFP (99% identity) | Eco0134DptFP | |
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| 2695 | DNA phosphorothioation-dependent restriction | |||
| ??? | R | SflFF24DptGP (99% identity) | Eco0134DptGP | |
| 2705 | DNA phosphorothioation-dependent restriction | |||
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| 2705 | R | EcosEC5DptHP (100% identity) | Eco0134DptHP | |
| 2710 | DNA sulfur modification protein DndB | |||
| 2715 | DGQHR domain-containing protein | |||
| 2720 | M | M.SflFF24DndEP (100% identity) | M.Eco0134DndEP | |
| 2725 | DNA sulfur modification protein DndD | |||
| 2720 | DNA sulfur modification protein DndE | |||
| 2725 | M | M.SflFF24DndDP (99% identity) | M.Eco0134DndDP | |
| 2730 | DNA phosphorothioation system sulfurtransferase | |||
| 2725 | DNA sulfur modification protein DndD | |||
| 2730 | M | M.SflFF24DndCP (100% identity) | M.Eco0134DndCP | |
| 2735 | DNA sulfur modification protein DndB | |||
| 2730 | DNA phosphorothioation system sulfurtransferase | |||
| 2735 | M | M.SflFF24DndBP (99% identity) | M.Eco0134DndBP | |
| 2740 | osmoprotectant transport activator ProQ | |||
| 12075 | 60 aa hypothetical protein | |||
| 12080 | M | M.SsoSE61ORF20220P (100% identity) | M.Eco0134ORF12080P | |
| 12085 | DUF977 family protein | |||
| 14400 | drug/metabolite exporter YedA | |||
| 14405 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco0134DcmP |
| 14410 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco0134DcmP |
| 14415 | phosphohydrolase | |||
| 18695 | replication endonuclease | |||
| 18700 | M | M.SspS13ORF8710P (84% identity) | M.Eco0134ORF18700P | |
| 18705 | TraR/DksA family transcriptional regulator | |||
| 22920 | ribulose-phosphate 3-epimerase | |||
| 22925 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco0134DamP |
| 22930 | cell division protein DamX | |||
| plasmid pZ1322PEC0134-2 | ||||
| 26085 | 103 aa hypothetical protein | |||
| 26090 | M | M.StyR64ORFAP (100% identity) | M.Eco0134ORF26090P | |
| 26095 | 73 aa hypothetical protein | |||
| plasmid pZ1322PEC0134-3 | ||||
| 26390 | recombination-associated protein RdgC | |||
| 26395 | M | M.Sen30575ORF26200P (97% identity) | M.Eco0134ORF26395P | |
| 26400 | 73 aa hypothetical protein | |||
| plasmid pZ1322PEC0134-4 | ||||
| 26950 | 98 aa hypothetical protein | |||
| 26955 | M | M.Xca80ORFEP (100% identity) | M.Eco0134ORF26955P | |
| 26960 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3085 | IS30-like element IS30 family transposase | |||
| 3090 | R | Ssp28760MrrP (100% identity) | Eco0134MrrP | |
| 3095 | GTPase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8915 | recombination protein NinB | |||
| 8920 | M | M.SflN97ORF8425P (100% identity) | GATC | M.Eco0134ORF8920P |
| 8925 | NinE family protein | |||