Escherichia coli Z1323CEC0018 |
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Putative Escherichia coli Z1323CEC0018 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
| Sequence length: | GenBank #: | |
| Chromosome: | 4,964,856 bp | CP148405 |
| plasmid pZ1323CEC0018-4: | 99,404 bp | CP148408 |
REBASE acronym: Eco0018
Org_num: 76630
All begin WHU75_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2685 | endoribonuclease SymE | |||
| 2690 | S | S.Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | S.Eco0018ORF2695P |
| 2695 | M | M.Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | M.Eco0018ORF2695P |
| 2700 | R | Ecos15955ORF12100P (99% identity) | RTCANNNNNNNCTTC | Eco0018ORF2695P |
| 2705 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20 | 318 aa hypothetical protein | |||
| 25 | M | M.EcoSCU109ORF25P (100% identity) | M.Eco0018ORF25P | |
| 30 | phage portal protein | |||
| 950 | 28 aa hypothetical protein | |||
| 955 | M | M.EcoE2aORF950P (100% identity) | GATC | M.Eco0018ORF955P |
| 960 | RusA family crossover junction | |||
| 7505 | TraR/DksA family transcriptional regulator | |||
| 7510 | M | M.EcoPEC0001ORF980P (100% identity) | GATC | M.Eco0018ORF7510P |
| 7515 | replication endonuclease | |||
| 11685 | 60 aa hypothetical protein | |||
| 11690 | M | M.SsoSE61ORF20220P (100% identity) | M.Eco0018ORF11690P | |
| 11695 | IS3 family transposase | |||
| 13930 | drug/metabolite exporter YedA | |||
| 13935 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco0018DcmP |
| 13940 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco0018DcmP |
| 13945 | phosphohydrolase | |||
| 21450 | DNA-binding transcriptional regulator Fis | |||
| 21455 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco0018ORF21455P |
| 21460 | DUF2556 family protein | |||
| 22075 | ribulose-phosphate 3-epimerase | |||
| 22080 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco0018DamP |
| 22085 | cell division protein DamX | |||
| plasmid pZ1323CEC0018-4 | ||||
| 26540 | recombination-associated protein RdgC | |||
| 26545 | M | M.EcoLH10b1ORF25220P (99% identity) | M.Eco0018ORF26545P | |
| 26550 | 86 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2700 | type I restriction-modification system | |||
| 2705 | R | Ssp28760MrrP (100% identity) | Eco0018MrrP | |
| 2710 | GTPase | |||
| 9565 | tail fiber assembly protein | |||
| 9570 | R | Ecos15955McrBP (100% identity) | Eco0018McrBP | |
| 9575 | R | Ecos15955McrCP (95% identity) | Eco0018McrCP | |
| 9580 | isocitrate/isopropylmalate family dehydrogenase | |||