Escherichia coli Z1323CEC0014 |
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Putative Escherichia coli Z1323CEC0014 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
Complete sequence: 5,304,263 bp
GenBank #: CP148426
REBASE acronym: EcoC0014
Org_num: 76634
All begin WHU39_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 680 | SprT family zinc-dependent metalloprotease | |||
| 685 | R | SspS13ORF2650P (99% identity) | EcoC0014ORF710P | |
| 690 | DUF262 domain-containing HNH endonuclease family | |||
| 695 | DUF262 domain-containing protein | |||
| 700 | restriction endonuclease subunit S | |||
| 705 | S | S.SspS13ORF2650P (68% identity) | S.EcoC0014ORF710P | |
| 710 | M | M.SspS13ORF2650P (99% identity) | M.EcoC0014ORF710P | |
| 715 | transcription factor | |||
| 25770 | adenine/cytosine-specific restriction | |||
| 25775 | R | Ecos15955ORF12100P (99% identity) | EcoC0014ORF25780P | |
| 25780 | M | M.Ecos15955ORF12100P (100% identity) | M.EcoC0014ORF25780P | |
| 25785 | S | S.Ecos15955ORF12100P (99% identity) | S.EcoC0014ORF25780P | |
| 25790 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1050 | IS3 family transposase | |||
| 1055 | M | M.EcoPEC0001ORF7750P (100% identity) | M.EcoC0014ORF1055P | |
| 1060 | 28 aa hypothetical protein | |||
| 2000 | IS21-like element ISEc12 family transposase | |||
| 2005 | M | M.EcoSCU109ORF25P (100% identity) | M.EcoC0014ORF2005P | |
| 2010 | 282 aa hypothetical protein | |||
| 5035 | cell division protein DamX | |||
| 5040 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC0014DamP |
| 5045 | ribulose-phosphate 3-epimerase | |||
| 5660 | DUF2556 family protein | |||
| 5665 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoC0014ORF5665P |
| 5670 | DNA-binding transcriptional regulator Fis | |||
| 12525 | recombination protein NinB | |||
| 12530 | M | M.SflN97ORF15810P (100% identity) | GATC | M.EcoC0014ORF12530P |
| 12535 | NinE family protein | |||
| 12910 | recombination protein NinB | |||
| 12915 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoC0014ORF12915P |
| 12920 | NinE family protein | |||
| 16450 | 60 aa hypothetical protein | |||
| 16455 | M | M.SsoSE61ORF20220P (100% identity) | M.EcoC0014ORF16455P | |
| 16460 | IS3 family transposase | |||
| 18805 | drug/metabolite exporter YedA | |||
| 18810 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoC0014DcmP |
| 18815 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoC0014DcmP |
| 18820 | phosphohydrolase | |||
| 21080 | replication endonuclease | |||
| 21085 | M | M.EcoPEC0001ORF980P (100% identity) | GATC | M.EcoC0014ORF21085P |
| 21090 | TraR/DksA family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14310 | tail fiber assembly protein | |||
| 14315 | R | EcoPEC0001McrBP (99% identity) | EcoC0014McrBP | |
| 14320 | R | Ecos15955McrCP (95% identity) | EcoC0014McrCP | |
| 14325 | isocitrate/isopropylmalate family dehydrogenase | |||
| 25765 | GTPase | |||
| 25770 | R | Ssp28760MrrP (100% identity) | EcoC0014MrrP | |
| 25775 | type I restriction-modification system | |||