Clostridium perfringens Z1323HCP0030 |
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Putative Clostridium perfringens Z1323HCP0030 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
| Sequence length: | GenBank #: | |
| Chromosome: | 3,351,004 bp | CP148641 |
| plasmid pZ1323HCP0030-2: | 75,262 bp | CP148642 |
REBASE acronym: Cpe30
Org_num: 76671
All begin WHY39_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1480 | cobalt ABC transporter permease | |||
| 1485 | M | M.Cpe8ORF15615P (100% identity) | M.Cpe30ORF1485P | |
| 1490 | GH25 family lysozyme | |||
| 5055 | pseudogene | |||
| 5060 | RM | Cpe83ORF10385P (100% identity) | Cpe30ORF5060P | |
| 5065 | 85 aa hypothetical protein | |||
| 5300 | 99 aa hypothetical protein | |||
| 5305 | RM | Cpe1527aORF7560P (100% identity) | Cpe30ORF5305P | |
| 5310 | IS30 family transposase | |||
| 6605 | N-acetylmuramoyl-L-alanine amidase | |||
| 6610 | M | M.Cpe5ORF665P (100% identity) | M.Cpe30ORF6610P | |
| 6615 | 61 aa hypothetical protein | |||
| 8255 | ATP-binding protein | |||
| 8260 | M | M.Cpe31ORF4580P (94% identity) | M.Cpe30ORF8260P | |
| 8265 | 161 aa hypothetical protein | |||
| 13465 | YhgE/Pip domain-containing protein | |||
| 13470 | M | M.CpeDel1ORF16090P (100% identity) | GTATAC | M.Cpe30ORF13470P |
| 13475 | peptide-methionine (S)-S-oxide reductase MsrA | |||
| plasmid pZ1323HCP0030-2 | ||||
| 15880 | 57 aa hypothetical protein | |||
| 15885 | M | M.Cpe8ORF15315P (100% identity) | M.Cpe30ORF15885P | |
| 15890 | 101 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10970 | 183 aa hypothetical protein | |||
| 10975 | R | Cpe83ORF4695P (100% identity) | Cpe30ORF10980P | |
| 10980 | M | M.Cpe72184ORF2185P (76% identity) | M1.Cpe30ORF10980P | |
| 10985 | M | M.CpeS1ORF24620AP (100% identity) | M2.Cpe30ORF10980P | |
| 10990 | 114 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8035 | 1209 aa hypothetical protein | |||
| 8040 | R | CpeJ1ORF5145P (99% identity) | Cpe30ORF8040P | |
| 8045 | ribosomal protein L7/L12 | |||
| 8170 | SdpI family protein | |||
| 8175 | R | Cpe7123McrC2P (97% identity) | Cpe30McrCP | |
| 8180 | R | CpeML2McrBP (97% identity) | Cpe30McrBP | |
| 8185 | 103 aa hypothetical protein | |||