Clostridium perfringens Z1323HCP0034 |
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Putative Clostridium perfringens Z1323HCP0034 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
| Sequence length: | GenBank #: | |
| Chromosome: | 3,269,812 bp | CP148629 |
| plasmid pZ1323HCP0034-2: | 72,982 bp | CP148630 |
| plasmid pZ1323HCP0034-3: | 54,382 bp | CP148631 |
REBASE acronym: Cpe34
Org_num: 76668
All begin WHY16_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7470 | protein kinase family protein | |||
| 7475 | S | S.BspM204ORF1455P (39% identity) | S.Cpe34ORF7480P | |
| 7480 | M | M.CpeHS7ORF4560P (99% identity) | M2.Cpe34ORF7480P | |
| 7485 | R | Cpe8449IP (98% identity) | Cpe34ORF7480P | |
| 7490 | RNA-directed DNA polymerase | |||
| 7495 | 190 aa hypothetical protein | |||
| 7500 | M | M1.Cpe05ORF4500P (99% identity) | M1.Cpe34ORF7480P | |
| 7505 | NERD domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 730 | DUF3780 domain-containing protein | |||
| 735 | M | M.Cpe53ORF735P (100% identity) | M.Cpe34ORF735P | |
| 740 | phospholipase D-like domain-containing | |||
| 4950 | cell envelope integrity protein TolA | |||
| 4955 | R | Cpe932DptFP (100% identity) | Cpe34DptFP | |
| 4960 | DNA phosphorothioation-dependent restriction | |||
| 4955 | DNA phosphorothioation-dependent restriction | |||
| 4960 | R | Cpe932DptGP (100% identity) | Cpe34DptGP | |
| 4965 | DNA phosphorothioation-dependent restriction | |||
| 4960 | DNA phosphorothioation-dependent restriction | |||
| 4965 | R | Cpe53DptHP (100% identity) | Cpe34DptHP | |
| 4970 | DUF262 domain-containing HNH endonuclease family | |||
| 4970 | DUF262 domain-containing HNH endonuclease family | |||
| 4975 | M | M.Cpe932DndAP (100% identity) | M.Cpe34DndAP | |
| 4980 | DndE family protein | |||
| 4975 | cysteine desulfurase family protein | |||
| 4980 | M | M.CpeN11DndEP (100% identity) | M.Cpe34DndEP | |
| 4985 | DNA sulfur modification protein DndD | |||
| 4980 | DndE family protein | |||
| 4985 | M | M.Cpe53DndDP (100% identity) | M.Cpe34DndDP | |
| 4990 | DNA phosphorothioation system sulfurtransferase | |||
| 4985 | DNA sulfur modification protein DndD | |||
| 4990 | M | M.Cpe932DndCP (100% identity) | M.Cpe34DndCP | |
| 4995 | DNA sulfur modification protein DndB | |||
| 4990 | DNA phosphorothioation system sulfurtransferase | |||
| 4995 | M | M.Cpe932DndBP (100% identity) | M.Cpe34DndBP | |
| 5000 | SH3 domain-containing protein | |||
| 12850 | YhgE/Pip domain-containing protein | |||
| 12855 | M | M.CpeS1ORF810P (100% identity) | GTATAC | M.Cpe34ORF12855P |
| 12860 | peptide-methionine (S)-S-oxide reductase MsrA | |||
| plasmid pZ1323HCP0034-2 | ||||
| 15190 | 57 aa hypothetical protein | |||
| 15195 | M | M.CpeF4013ORFAP (100% identity) | M.Cpe34ORF15195P | |
| 15200 | 101 aa hypothetical protein | |||
| plasmid pZ1323HCP0034-3 | ||||
| 15480 | GH25 family lysozyme | |||
| 15485 | M | M.Cpe8ORF15615P (100% identity) | M.Cpe34ORF15485P | |
| 15490 | cobalt ABC transporter permease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10310 | 183 aa hypothetical protein | |||
| 10315 | R | Cpe83ORF4695P (100% identity) | Cpe34ORF10320P | |
| 10320 | M | M.Cpe72184ORF2185P (76% identity) | M1.Cpe34ORF10320P | |
| 10325 | M | M.CpeS1ORF24620AP (100% identity) | M2.Cpe34ORF10320P | |
| 10330 | 114 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7530 | AAA domain-containing protein | |||
| 7535 | R | Cpe05ORF4465P (99% identity) | Cpe34ORF7535P | |
| 7540 | 99 aa hypothetical protein | |||