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Putative Alteromonas macleodii KD01 RM systems
Ref: Zhang,D. and Yin,Y. unpublished
REBASE ref # 38504
Sequence length: | GenBank #: | |
Chromosome: | 4,603,466 bp | CP147978 |
plasmid pKD01: | 336,015 bp | CP147979 |
plasmid pKD03: | 77,913 bp | CP147981 |
REBASE acronym: AmaKD01
Org_num: 76408
All begin WE348_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
4260 | 468 aa hypothetical protein | |||
4265 | M | M1.Ama615ORF4520P (93% identity) | M1.AmaKD01ORF4265P | |
4270 | M | M2.PspS1ORF14175P (95% identity) | M2.AmaKD01ORF4265P | |
4275 | S | S.Mbu5GORFBP (28% identity) | S.AmaKD01ORF4265P | |
4280 | R | Ama615ORF4520P (97% identity) | AmaKD01ORF4265P | |
4285 | AAA family ATPase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1805 | DUF2970 domain-containing protein | |||
1810 | M | M.AmaA3DamP (99% identity) | M.AmaKD01DamP | |
1815 | cell division protein DamX | |||
plasmid pKD01 | ||||
21240 | RsmD family RNA methyltransferase | |||
21245 | M | M.AmeRG65ORF19670P (96% identity) | M.AmaKD01ORF21245P | |
21250 | 60 aa hypothetical protein | |||
21315 | DUF6283 family protein | |||
21320 | M | M.VcaC013ORF26365P (38% identity) | M.AmaKD01ORF21320P | |
21325 | phosphate ABC transporter substrate-binding | |||
plasmid pKD03 | ||||
23135 | 102 aa hypothetical protein | |||
23140 | M | M.PrhCg6ORFEP (45% identity) | M.AmaKD01ORF23140P | |
23145 | methyltransferase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
8895 | SNF2-related protein | |||
8900 | M | M.RorVR1ORF60280P (60% identity) | M.AmaKD01ORF8900P | |
8905 | R | RorVR1ORF60280P (87% identity) | AmaKD01ORF8900P | |
8910 | 163 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
400 | nuclease-related domain-containing protein | |||
405 | R | Ama673ORF440P (100% identity) | AmaKD01ORF405P | |
410 | class I SAM-dependent methyltransferase | |||
15745 | alpha/beta fold hydrolase | |||
15750 | R | AmaPu01McrCP (100% identity) | AmaKD01McrCP | |
15755 | R | AmaPu01McrBP (100% identity) | AmaKD01McrBP | |
15760 | NAD(P)H-dependent oxidoreductase |