Escherichia coli GN05652 |
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Putative Escherichia coli GN05652 RM systems
Ref: Parsons,J.B. et al. Proc Natl Acad Sci U S A 121 (3), e2314514121 (2024)
REBASE ref # 38499
| Sequence length: | GenBank #: | |
| Chromosome: | 5,214,178 bp | CP147614 |
| plasmid unnamed1: | 140,388 bp | CP147615 |
REBASE acronym: Eco652
Org_num: 76431
All begin WCU13_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19440 | type IV toxin-antitoxin system AbiEi family | |||
| 19445 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco652ORF19450P |
| 19450 | M | M.Eco098ORF19740P (100% identity) | AAAGNNNNGTT | M.Eco652ORF19450P |
| 19455 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco652ORF19450P |
| 19460 | 156 aa hypothetical protein | |||
| 21265 | restriction endonuclease | |||
| 21270 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco652ORF21270P |
| 21275 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco652ORF21270P |
| 21280 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Eco652ORF21270P |
| 21285 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2295 | DUF2556 family protein | |||
| 2300 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco652ORF2300P |
| 2305 | DNA-binding transcriptional regulator Fis | |||
| 6290 | 257 aa hypothetical protein | |||
| 6295 | M | M.Sso8033ORF3755P (100% identity) | CCWGG | M.Eco652ORF6295P |
| 6300 | R | Sso8033ORF3755P (99% identity) | CCWGG | Eco652ORF6295P |
| 6305 | 121 aa hypothetical protein | |||
| 9775 | phosphohydrolase | |||
| 9780 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco652DcmP |
| 9785 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco652DcmP |
| 9790 | drug/metabolite exporter YedA | |||
| 10655 | antiterminator Q family protein | |||
| 10660 | M | M2.EcosS3ORF2905P (100% identity) | GTCGAC | M1.Eco652ORF10660P |
| 10665 | R | R2.EcosS3ORF2905P (100% identity) | GTCGAC | R1.Eco652ORF10660P |
| 10670 | R | R1.EcosS3ORF2905P (100% identity) | GTCGAC | R2.Eco652ORF10660P |
| 10675 | TrmB family transcriptional regulator | |||
| 10680 | M | M1.EcosS3ORF2905P (100% identity) | M2.Eco652ORF10660P | |
| 10685 | DUF6645 domain-containing protein | |||
| 13665 | DUF3927 family protein | |||
| 13680 | M | M.EcosS9ORF10680P (100% identity) | A | M.Eco652ORF13680P |
| 13685 | TrmB family transcriptional regulator | |||
| 15945 | helix-turn-helix transcriptional regulator | |||
| 15950 | M | M.KpnYN1ORFGP (89% identity) | M.Eco652ORF15950P | |
| 15955 | 71 aa hypothetical protein | |||
| 21625 | McrC family protein | |||
| 21630 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco652ORF21635P |
| 21635 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Eco652ORF21635P |
| 21640 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco652ORF21635P |
| 21645 | helix-turn-helix domain-containing protein | |||
| 22950 | response regulator receiver domain | |||
| 22955 | R | EcosS3ORF15775P (100% identity) | Eco652ORF22960P | |
| 22960 | M | M.EcosS3ORF15775P (100% identity) | M.Eco652ORF22960P | |
| 22965 | conjugal transfer protein TraG N-terminal | |||
| plasmid unnamed1 | ||||
| 26020 | 103 aa hypothetical protein | |||
| 26025 | M | M.KpnVA569ORF28145P (100% identity) | M.Eco652ORF26025P | |
| 26030 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21260 | BrnT family toxin | |||
| 21265 | R | Ecou021MrrP (100% identity) | Eco652MrrP | |
| 21270 | class I SAM-dependent DNA methyltransferase | |||