Escherichia coli GN03590 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli GN03590 RM systems
Ref: Parsons,J.B. et al. Proc Natl Acad Sci U S A 121 (3), e2314514121 (2024)
REBASE ref # 38499
| Sequence length: | GenBank #: | |
| Chromosome: | 4,727,575 bp | CP147574 |
| plasmid unnamed1: | 103,982 bp | CP147575 |
REBASE acronym: Eco03590
Org_num: 76372
All begin WCU32_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17345 | type IV toxin-antitoxin system AbiEi family | |||
| 17350 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco03590ORF17355P |
| 17355 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco03590ORF17355P |
| 17360 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco03590ORF17355P |
| 17365 | 156 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1705 | cell division protein DamX | |||
| 1710 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco03590DamP |
| 1715 | ribulose-phosphate 3-epimerase | |||
| 2305 | DUF2556 family protein | |||
| 2310 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco03590ORF2310P |
| 2315 | DNA-binding transcriptional regulator Fis | |||
| 9230 | phosphohydrolase | |||
| 9235 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco03590DcmP |
| 9240 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco03590DcmP |
| 9245 | drug/metabolite exporter YedA | |||
| 19200 | McrC family protein | |||
| 19205 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco03590ORF19210P |
| 19210 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Eco03590ORF19210P |
| 19215 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco03590ORF19210P |
| 19220 | helix-turn-helix domain-containing protein | |||
| 19505 | response regulator receiver domain | |||
| 19510 | R | Ecos19ORF20635P (100% identity) | Eco03590ORF19510P | |
| 19515 | 97 aa hypothetical protein | |||
| plasmid unnamed1 | ||||
| 23220 | 73 aa hypothetical protein | |||
| 23225 | M | M.Sen21978ORF23935P (100% identity) | M.Eco03590ORF23225P | |
| 23230 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19190 | glycosyltransferase family 2 protein | |||
| 19195 | R | EcosS3McrBP (100% identity) | Eco03590McrBP | |
| 19200 | R | EcosS9McrCP (100% identity) | Eco03590McrCP | |
| 19205 | Alw26I/Eco31I/Esp3I family type II restriction | |||