Pseudomonas aeruginosa HDR5_1 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Pseudomonas aeruginosa HDR5_1 RM systems
Ref: Zurita,J. and Sevillano,G. unpublished
REBASE ref # 38463
Complete sequence: 7,822,141 bp
GenBank #: CP146908
REBASE acronym: PaeHDR51
Org_num: 76272
All begin V9W41_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20515 | 77 aa hypothetical protein | |||
| 20520 | R | PaesC79ORF16485P (100% identity) | PaeHDR51ORF20530P | |
| 20525 | Abi family protein | |||
| 20530 | M | M.PaesC79ORF16485P (100% identity) | M.PaeHDR51ORF20530P | |
| 20535 | S | S.PaesC79ORF16485P (100% identity) | S.PaeHDR51ORF20530P | |
| 20540 | AAA family ATPase | |||
| 35175 | 115 aa hypothetical protein | |||
| 35180 | M | M.KpnvKP11ORFAP (88% identity) | M.PaeHDR51ORF35180P | |
| 35185 | LuxR C-terminal-related transcriptional | |||
| 36065 | IS110 family transposase | |||
| 36070 | S | S2.Eho643ORF20540P (65% identity) | S.PaeHDR51ORF36070P | |
| 36075 | R | EhoEhh22ORF20275P (100% identity) | PaeHDR51ORF36070P | |
| 36080 | YaaW family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15415 | 69 aa hypothetical protein | |||
| 15420 | M | M.PaeLo535ORF16505P (99% identity) | M1.PaeHDR51ORF15420P | |
| 15425 | M | M.PaePB354ORF6095P (97% identity) | M2.PaeHDR51ORF15420P | |
| 15430 | class I SAM-dependent methyltransferase | |||
| 20590 | 344 aa hypothetical protein | |||
| 20595 | RM | PaeF043ORF5660P (83% identity) | PaeHDR51ORF20595P | |
| 20600 | helix-turn-helix domain-containing protein | |||
| 30390 | 321 aa hypothetical protein | |||
| 30395 | V | V.PaeSH3AORF11445P (100% identity) | V.PaeHDR51ORF30400P | |
| 30400 | M | M.PaesC79ORF10395P (100% identity) | M.PaeHDR51ORF30400P | |
| 30405 | ATP-binding protein | |||
| 30785 | 277 aa hypothetical protein | |||
| 30790 | M | M.Ssp15303ORFEP (100% identity) | GATC | M.PaeHDR51ORF30790P |
| 30795 | 387 aa hypothetical protein | |||
| 30910 | 203 aa hypothetical protein | |||
| 30915 | M | M.Ssp15303ORFDP (100% identity) | M.PaeHDR51ORF30915P | |
| 30920 | 106 aa hypothetical protein | |||
| 32535 | 142 aa hypothetical protein | |||
| 32540 | M | M1.Kpn338ORF19840P (100% identity) | M1.PaeHDR51ORF32540P | |
| 32545 | M | M1.Kae231ORF20870P (34% identity) | M2.PaeHDR51ORF32540P | |
| 32550 | TraR/DksA family transcriptional regulator | |||
| 32685 | 753 aa hypothetical protein | |||
| 32690 | M | M.PciWXP4ORF27915P (95% identity) | M.PaeHDR51ORF32690P | |
| 32695 | tyrosine-type recombinase/integrase | |||
| 34815 | anaerobic sulfatase maturase | |||
| 34820 | R | KaeSL269ORF5380P (100% identity) | PaeHDR51ORF34825P | |
| 34825 | M | M.KaeSL269ORF5380P (100% identity) | M.PaeHDR51ORF34825P | |
| 34830 | Crp/Fnr family transcriptional regulator | |||
| 34835 | helix-turn-helix transcriptional regulator | |||
| 34840 | C | C.KaeSL269ORF5380P (100% identity) | C.PaeHDR51ORF34825P | |
| 34845 | helix-turn-helix transcriptional regulator | |||
| 35515 | thermonuclease family protein | |||
| 35520 | M | M.YpsF1ORFCP (32% identity) | M.PaeHDR51ORF35520P | |
| 35525 | glycerol dehydrogenase | |||
| 35875 | mannose-1-phosphate | |||
| 35880 | M | M.YpsF1ORFCP (68% identity) | M.PaeHDR51ORF35880P | |
| 35885 | 55 aa hypothetical protein | |||
| 36175 | T6SS immunity periplasmic lipoprotein | |||
| 36180 | R | Kpn327ORF11965P (100% identity) | PaeHDR51ORF36180P | |
| 36185 | HNH endonuclease | |||
| 36280 | IS1 family transposase | |||
| 36285 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.PaeHDR51ORF36285P |
| 36290 | R | YpsR1ORFAP (100% identity) | CCWGG | PaeHDR51ORF36285P |
| 36295 | 21 aa hypothetical protein | |||