Escherichia coli MS 198-1 |
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Putative Escherichia coli MS 198-1 RM systems
Ref: Tsai,M.T. unpublished
REBASE ref # 38435
Complete sequence: 5,285,120 bp
GenBank #: CP146687
REBASE acronym: Eco1981
Org_num: 76174
All begin V9Z43_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22245 | adenine/cytosine-specific restriction | |||
| 22250 | R | Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | Eco1981ORF22255P |
| 22255 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.Eco1981ORF22255P |
| 22260 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.Eco1981ORF22255P |
| 22265 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1955 | cell division protein DamX | |||
| 1960 | M | M.Ecos69DamP (100% identity) | GATC | M.Eco1981DamP |
| 1965 | ribulose-phosphate 3-epimerase | |||
| 2485 | DUF2556 family protein | |||
| 2490 | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.Eco1981ORF2490P |
| 2495 | DNA-binding transcriptional regulator Fis | |||
| 7070 | DUF1382 family protein | |||
| 7075 | M | M.SspPIBORF6330P (100% identity) | GATC | M.Eco1981ORF7075P |
| 7080 | PerC family transcriptional regulator | |||
| 10725 | phosphohydrolase | |||
| 10730 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.Eco1981DcmP |
| 10735 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.Eco1981DcmP |
| 10740 | drug/metabolite exporter YedA | |||
| 15050 | NinE family protein | |||
| 15055 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco1981ORF15055P |
| 15060 | recombination protein NinB | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22240 | GTPase | |||
| 22245 | R | Ssp28760MrrP (100% identity) | Eco1981MrrP | |
| 22250 | type I restriction-modification system | |||
| 22265 | endoribonuclease SymE | |||
| 22270 | R | SenHNK130McrBP (100% identity) | Eco1981McrBP | |
| 22275 | R | SenHNK130McrCP (100% identity) | Eco1981McrCP | |