Escherichia coli MS 57-2 |
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Putative Escherichia coli MS 57-2 RM systems
Ref: Tsai,M.T. unpublished
REBASE ref # 38435
| Sequence length: | GenBank #: | |
| Chromosome: | 4,728,726 bp | CP146660 |
| plasmid unnamed1: | 161,662 bp | CP146661 |
REBASE acronym: Eco572
Org_num: 76177
All begin V9Z45_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19425 | DUF262 domain-containing HNH endonuclease family | |||
| 19430 | R | EcoUTI89IIP (100% identity) | CGAYNNNNNNNNTGCC | Eco572ORF19435P |
| 19435 | M | M.SspS13ORF3945P (100% identity) | CGAYNNNNNNNNTGCC | M.Eco572ORF19435P |
| 19440 | S | S.EcoA13I (100% identity) | CGAYNNNNNNNNTGCC | S.Eco572ORF19435P |
| 19445 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1705 | cell division protein DamX | |||
| 1710 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco572DamP |
| 1715 | ribulose-phosphate 3-epimerase | |||
| 2305 | DUF2556 family protein | |||
| 2310 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco572ORF2310P |
| 2315 | DNA-binding transcriptional regulator Fis | |||
| 6045 | DUF1382 family protein | |||
| 6050 | M | M.Esp911AORF3194P (100% identity) | GATC | M.Eco572ORF6050P |
| 6055 | PerC family transcriptional regulator | |||
| 9135 | phosphohydrolase | |||
| 9140 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco572DcmP |
| 9145 | V | V.EcoTob1DcmP (100% identity) | V.Eco572DcmP | |
| 9150 | drug/metabolite exporter YedA | |||
| 15080 | replication endonuclease | |||
| 15085 | M | M.Eco475ORF125P (99% identity) | GATC | M.Eco572ORF15085P |
| 15090 | DUF3850 domain-containing protein | |||
| 19675 | HNH endonuclease | |||
| 19680 | R | EcosLF82ORF3205P (96% identity) | Eco572ORF19680P | |
| 19685 | type III restriction-modification system | |||
| plasmid unnamed1 | ||||
| 23055 | 120 aa hypothetical protein | |||
| 23060 | M | M.Sma6556ORF27745P (100% identity) | M.Eco572ORF23060P | |
| 23065 | 143 aa hypothetical protein | |||
| 23430 | 100 aa hypothetical protein | |||
| 23435 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.Eco572ORF23435P |
| 23440 | 143 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19680 | HNH endonuclease | |||
| 19685 | R | EcosLF82ORF3195P (100% identity) | CRACAG | Eco572ORF19690P |
| 19690 | M | M.EcosLF82ORF3195P (100% identity) | CRACAG | M.Eco572ORF19690P |
| 19695 | 120 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19445 | endoribonuclease SymE | |||
| ??? | R | EcoA13GmrSDP (100% identity) | Eco572GmrSDP | |
| 19460 | Rpn family recombination-promoting | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21830 | 59 aa hypothetical protein | |||
| 21835 | M | M.Eco382hORF13235P (98% identity) | M.Eco572ORF21835P | |
| 21840 | 70 aa hypothetical protein | |||