Escherichia coli B1.H1.1 |
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Putative Escherichia coli B1.H1.1 RM systems
Ref: Rolbiecki,D. unpublished
REBASE ref # 38400
| Sequence length: | GenBank #: | |
| Chromosome: | 5,100,887 bp | CP146571 |
| plasmid pB1.H1.1.c2: | 122,590 bp | CP146572 |
REBASE acronym: EcoB1H11
Org_num: 76038
All begin V8956_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9850 | adenine/cytosine-specific restriction | |||
| 9855 | R | Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | EcoB1H11ORF9860P |
| 9860 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.EcoB1H11ORF9860P |
| 9865 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.EcoB1H11ORF9860P |
| 9870 | endoribonuclease SymE | |||
| plasmid pB1.H1.1.c2 | ||||
| 25365 | type II toxin-antitoxin system Phd/YefM family | |||
| 25370 | M | M.SflFF34ORF9300P (60% identity) | M.EcoB1H11ORF25370P | |
| 25375 | IS1-like element IS1A family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3795 | DNA-binding transcriptional regulator Fis | |||
| 3800 | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.EcoB1H11ORF3800P |
| 3805 | DUF2556 family protein | |||
| 5670 | helix-turn-helix transcriptional regulator | |||
| 5675 | M | M.EcosR9ORF575P (100% identity) | M.EcoB1H11ORF5675P | |
| 5680 | 71 aa hypothetical protein | |||
| 16710 | recombination protein NinB | |||
| 16715 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoB1H11ORF16715P |
| 16720 | NinE family protein | |||
| 17645 | TrmB family transcriptional regulator | |||
| 17650 | M | M.SsoCS14ORF10750P (100% identity) | A | M.EcoB1H11ORF17650P |
| 17670 | 39 aa hypothetical protein | |||
| 21350 | drug/metabolite exporter YedA | |||
| 21355 | V | V.Ecostr9DcmP (74% identity) | CCWGG | V.EcoB1H11DcmP |
| 21360 | M | M.Ecou021DcmP (100% identity) | CCWGG | M.EcoB1H11DcmP |
| 21365 | phosphohydrolase | |||
| plasmid pB1.H1.1.c2 | ||||
| 25425 | 101 aa hypothetical protein | |||
| 25430 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoB1H11ORF25430P |
| 25435 | 73 aa hypothetical protein | |||
| 25880 | EAL domain-containing protein | |||
| 25885 | R | YpsR1ORFAP (100% identity) | CCWGG | EcoB1H11ORF25890P |
| 25890 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.EcoB1H11ORF25890P |
| 25895 | IS1 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9845 | GTPase | |||
| 9850 | R | Ssp28760MrrP (100% identity) | EcoB1H11MrrP | |
| 9855 | type I restriction-modification system | |||
| 9870 | endoribonuclease SymE | |||
| 9875 | R | SenHNK130McrBP (100% identity) | EcoB1H11McrBP | |
| 9880 | R | SenHNK130McrCP (100% identity) | EcoB1H11McrCP | |