Escherichia marmotae CNCTC 8131 |
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Putative Escherichia marmotae CNCTC 8131 RM systems
Ref: Chmel,M. and Malisova,L. unpublished
REBASE ref # 38405
| Sequence length: | GenBank #: | |
| Chromosome: | 4,697,220 bp | CP146380 |
| plasmid unnamed1: | 105,106 bp | CP146381 |
| plasmid unnamed3: | 166,204 bp | CP146383 |
REBASE acronym: Ema8131
Org_num: 76072
All begin V8U24_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10030 | adenine/cytosine-specific restriction | |||
| 10035 | R | EmaYF8ORF2785P (100% identity) | Ema8131ORF10040P | |
| 10040 | M | M.EmaYF8ORF2785P (100% identity) | M.Ema8131ORF10040P | |
| 10045 | S | S.EmaYF8ORF2785P (90% identity) | S.Ema8131ORF10040P | |
| 10050 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 260 | recombination protein NinB | |||
| 265 | M | M.EmaYF8ORF12415P (100% identity) | GATC | M.Ema8131ORF265P |
| 270 | NinE family protein | |||
| 11010 | BREX system P-loop protein BrxC | |||
| 11015 | RM | EmaYF8ORF1835P (100% identity) | GATCAG | Ema8131ORF11015P |
| 11020 | BREX-1 system phosphatase PglZ type A | |||
| 14975 | cell division protein DamX | |||
| 14980 | M | M.Esp9308DamP (100% identity) | GATC | M.Ema8131DamP |
| 14985 | ribulose-phosphate 3-epimerase | |||
| 15520 | DUF2556 family protein | |||
| 15525 | M | M.Esp9308ORFJP (100% identity) | ATGCAT | M.Ema8131ORF15525P |
| 15530 | DNA-binding transcriptional regulator Fis | |||
| 21570 | recombination protein NinB | |||
| 21575 | M | M.SflWW1ORF7070P (99% identity) | GATC | M.Ema8131ORF21575P |
| 21580 | NinE family protein | |||
| 22145 | phosphohydrolase | |||
| 22150 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Ema8131DcmP |
| 22155 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Ema8131DcmP |
| 22160 | drug/metabolite exporter YedA | |||
| 22405 | recombination protein NinB | |||
| 22410 | M | M.EmaYF8ORF12415P (100% identity) | GATC | M.Ema8131ORF22410P |
| 22415 | NinE family protein | |||
| plasmid unnamed1 | ||||
| 23185 | IS1 family transposase | |||
| 23190 | M | M.KpnsKP27ORF26450P (100% identity) | CCWGG | M.Ema8131ORF23190P |
| 23195 | R | Sen23701ORF24490P (100% identity) | CCWGG | Ema8131ORF23190P |
| 23200 | recombinase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10025 | GTPase | |||
| 10030 | R | EmaYF8MrrP (100% identity) | Ema8131MrrP | |
| 10035 | type I restriction-modification system | |||
| 10050 | endoribonuclease SymE | |||
| 10055 | R | EmaYF8McrBP (100% identity) | Ema8131McrBP | |
| 10060 | R | EmaYF8McrCP (100% identity) | Ema8131McrCP | |
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed3 | ||||
| 23895 | 269 aa hypothetical protein | |||
| 23900 | M | M.Ema8131ORF24540P (100% identity) | M.Ema8131ORF23900P | |
| 23905 | 76 aa hypothetical protein | |||
| 24535 | 269 aa hypothetical protein | |||
| 24540 | M | M.Ema8131ORF23900P (100% identity) | M.Ema8131ORF24540P | |
| 24545 | 76 aa hypothetical protein | |||