Lachnospiraceae bacterium JLR.KK008 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Lachnospiraceae bacterium JLR.KK008 RM systems
Ref: Weis,A. et al. unpublished
REBASE ref # 38394
Complete sequence: 3,188,848 bp
GenBank #: CP143548
REBASE acronym: Lba8
Org_num: 76099
All begin V1224_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5500 | S8 family peptidase | |||
| 5505 | M | M.AspMES1ORF12300P (82% identity) | M.Lba8ORF5505P | |
| 5510 | 116 aa hypothetical protein | |||
| 5515 | S | S3.Fpr95bII (69% identity) | S1.Lba8ORF5505P | |
| 5520 | 297 aa hypothetical protein | |||
| 5525 | DUF1848 domain-containing protein | |||
| 5530 | R | AspMES1ORF12300P (77% identity) | Lba8ORF5505P | |
| 5535 | S | S.Msp11bORFAP (44% identity) | S2.Lba8ORF5505P | |
| 5540 | 474 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1225 | helix-turn-helix transcriptional regulator | |||
| 1230 | R | SmoLVIP (69% identity) | Lba8ORF1235P | |
| 1235 | M | M.EfaLS394ORF13590P (54% identity) | M.Lba8ORF1235P | |
| 1240 | macro domain-containing protein | |||
| 2570 | 405 aa hypothetical protein | |||
| 2575 | RM | ObaE38ORF4795P (54% identity) | Lba8ORF2575P | |
| 2580 | BREX-1 system phosphatase PglZ type A | |||
| 5225 | 103 aa hypothetical protein | |||
| 5230 | M | M.Aur25976ORF800P (34% identity) | M.Lba8ORF5230AP | |
| 5235 | M | M.Aur25976ORF800P (13% identity) | M.Lba8ORF5230BP | |
| 5240 | 86 aa hypothetical protein | |||
| 9390 | serine/arginine repetitive matrix protein 2 | |||
| 9395 | V | V.BinAORF2679P (74% identity) | V.Lba8ORF9410P | |
| 9400 | Z1 domain-containing protein | |||
| 9405 | R | Rba16ORF2790P (74% identity) | Lba8ORF9410P | |
| 9410 | M | M.Rba16ORF2790P (88% identity) | M.Lba8ORF9410P | |
| 9415 | recombinase family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4800 | PatB family C-S lyase | |||
| 4805 | M | M.SanVSI68ORF6835P (52% identity) | M.Lba8ORF4805P | |
| 4810 | R | Sra31377ORF7395P (54% identity) | Lba8ORF4805P | |
| 4815 | replication-associated recombination protein A | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2670 | AAC(3) family N-acetyltransferase | |||
| 2675 | R | Udi49782GmrSDP (28% identity) | Lba8GmrSDP | |
| 2680 | 88 aa hypothetical protein | |||