Escherichia coli PA8 |
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Putative Escherichia coli PA8 RM systems
Ref: Gonzalez-Escalona,N. et al. unpublished
REBASE ref # 38404
| Sequence length: | GenBank #: | |
| Chromosome: | 5,473,983 bp | CP145946 |
| plasmid unnamed: | 94,154 bp | CP145947 |
REBASE acronym: EcosPA8
Org_num: 76047
All begin V6773_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3410 | drug/metabolite exporter YedA | |||
| 3415 | V | V.EcosPA2DcmP (100% identity) | CCWGG | V.EcosPA8DcmP |
| 3420 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcosPA8DcmP |
| 3425 | phosphohydrolase | |||
| 6645 | LexA family transcriptional regulator | |||
| 6650 | M | M.Sso1099I (100% identity) | CTGCAG | M.EcosPA8ORF6650P |
| 6655 | R | Sso1099IP (100% identity) | CTGCAG | EcosPA8ORF6650P |
| 6660 | Rha family transcriptional regulator | |||
| 6785 | regulator | |||
| 6790 | M | M.EspP079ORF2847P (100% identity) | GATC | M.EcosPA8ORF6790P |
| 6795 | DUF1382 family protein | |||
| 11505 | DNA-binding transcriptional regulator Fis | |||
| 11510 | M | M.EcosPA2ORF6685P (100% identity) | ATGCAT | M.EcosPA8ORF11510P |
| 11515 | DUF2556 family protein | |||
| 12020 | ribulose-phosphate 3-epimerase | |||
| 12025 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcosPA8DamP |
| 12030 | cell division protein DamX | |||
| 16095 | 65 aa hypothetical protein | |||
| 16100 | M | M.EcosPA2ORF11270P (100% identity) | M.EcosPA8ORF16100P | |
| 16105 | Eae protein | |||
| 17345 | transposase | |||
| 17350 | R | EcosPA2ORF12520P (100% identity) | EcosPA8ORF17350P | |
| 17355 | N-acetylneuraminic acid mutarotase | |||
| 17385 | DEAD/DEAH box helicase | |||
| 17390 | RM | EcosPA2ORF12560P (100% identity) | GAAABCC | EcosPA8ORF17390P |
| 27240 | DUF6645 domain-containing protein | |||
| 27255 | M | M.EcosPA2ORF23155P (100% identity) | M.EcosPA8ORF27255P | |
| 27260 | TrmB family transcriptional regulator | |||
| plasmid unnamed | ||||
| 27770 | 73 aa hypothetical protein | |||
| 27775 | M | M.EcosPA2ORF27375P (100% identity) | M.EcosPA8ORF27775P | |
| 27780 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17590 | DUF1127 domain-containing protein | |||
| ??? | R | EcosPA2GmrSDP (100% identity) | EcosPA8GmrSDP | |
| 17605 | endoribonuclease SymE | |||