Lactobacillus delbrueckii subsp. lactis CKDB001 |
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Putative Lactobacillus delbrueckii subsp. lactis CKDB001 RM systems
Ref: Joung,H. et al. unpublished
REBASE ref # 38415
Complete sequence: 2,052,085 bp
GenBank #: CP145818
REBASE acronym: Lde1
Org_num: 76103
All begin V6511_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5715 | NAD(P)H-binding protein | |||
| 5720 | R | Lde88ORFAP (99% identity) | Lde1ORF5725P | |
| 5725 | M | M.Lde3035ORF3115P (99% identity) | M.Lde1ORF5725P | |
| 5730 | S | S.LplJ26ORF2710P (57% identity) | S.Lde1ORF5725P | |
| 5735 | LysR family transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 130 | nitroreductase family protein | |||
| 135 | M | M.Lde1ORF10410P (100% identity) | M.Lde1ORF135P | |
| 140 | R | Lde1ORF10410P (94% identity) | Lde1ORF135P | |
| 145 | Z1 domain-containing protein | |||
| 150 | V | V.Lde1ORF10410P (100% identity) | V.Lde1ORF135P | |
| 155 | 121 aa hypothetical protein | |||
| 6155 | N-acetyltransferase family protein | |||
| 6160 | M | M.LdeP3MRAORF5135P (98% identity) | M.Lde1ORF6160P | |
| 6165 | RM | Lde202ORF5175P (93% identity) | Lde1ORF6160P | |
| 6170 | Fic family protein | |||
| 10405 | nitroreductase family protein | |||
| 10410 | M | M.Lde1ORF135P (100% identity) | M.Lde1ORF10410P | |
| 10415 | R | Lde1ORF135P (94% identity) | Lde1ORF10410P | |
| 10420 | 115 aa hypothetical protein | |||
| 10425 | 74 aa hypothetical protein | |||
| 10430 | 68 aa hypothetical protein | |||
| 10435 | 181 aa hypothetical protein | |||
| 10440 | 92 aa hypothetical protein | |||
| 10445 | Z1 domain-containing protein | |||
| 10450 | V | V.Lde1ORF135P (100% identity) | V.Lde1ORF10410P | |
| 10455 | 121 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6370 | 110 aa hypothetical protein | |||
| 6375 | R | LdeF36IIIP (93% identity) | Lde1ORF6390P | |
| 6380 | IS30-like element ISL7 family transposase | |||
| 6385 | 59 aa hypothetical protein | |||
| 6390 | M | M.LdeBORF1230P (64% identity) | M.Lde1ORF6390BP | |
| 6395 | IS30-like element ISL7 family transposase | |||
| 6400 | M | M.LdeBORF1230P (33% identity) | M.Lde1ORF6390AP | |
| 6405 | DUF4391 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 965 | ECF transporter S component | |||
| 970 | R | Lde3202ORF300P (99% identity) | Lde1ORF970P | |
| 975 | DUF975 family protein | |||
| 2915 | 23S rRNA (uracil(1939)-C(5))-methyltransferase | |||
| 2920 | R | Lde26046MrrP (99% identity) | Lde1MrrP | |
| 2925 | carbonic anhydrase family protein | |||
| 6415 | helicase-related protein | |||
| 6420 | R | LdeL10GmrSDP (74% identity) | Lde1GmrSDBP | |
| 6425 | R | LdeLDBC1GmrSDP (23% identity) | Lde1GmrSDAP | |
| 6430 | transposase | |||
| 8955 | 102 aa hypothetical protein | |||
| 8960 | R | Lde34717ORF495P (99% identity) | Lde1ORF8960P | |
| 8965 | UDP-glucose 4-epimerase GalE | |||