Escherichia coli S1-SRB-02-B |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli S1-SRB-02-B RM systems
Ref: Campos-Madueno,E.I. et al. unpublished
REBASE ref # 38392
| Sequence length: | GenBank #: | |
| Chromosome: | 5,060,607 bp | CP145618 |
| plasmid p1-S1-SRB-02-B: | 72,340 bp | CP145619 |
REBASE acronym: Eco02B
Org_num: 76068
All begin V6S49_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5800 | GTPase family protein | |||
| 5805 | M | M.Eco550ORF20135P (100% identity) | M.Eco02BORF5805P | |
| 5810 | S | S.Eco550ORF20135P (100% identity) | S.Eco02BORF5805P | |
| 5815 | R | Eco550ORF20135P (100% identity) | Eco02BORF5805P | |
| 5820 | transposase | |||
| 11905 | adenine/cytosine-specific restriction | |||
| 11910 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | Eco02BORF11915P |
| 11915 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.Eco02BORF11915P |
| 11920 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco02BORF11915P |
| 11925 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 805 | phosphohydrolase | |||
| 810 | M | M.EcosE1DcmP (100% identity) | CCWGG | M.Eco02BDcmP |
| 815 | V | V.Ecostr9DcmP (74% identity) | CCWGG | V.Eco02BDcmP |
| 820 | drug/metabolite exporter YedA | |||
| 5080 | NinE family protein | |||
| 5085 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco02BORF5085P |
| 5090 | recombination protein NinB | |||
| 17255 | cell division protein DamX | |||
| 17260 | M | M.Ecos69DamP (100% identity) | GATC | M.Eco02BDamP |
| 17265 | ribulose-phosphate 3-epimerase | |||
| 17785 | DUF2556 family protein | |||
| 17790 | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.Eco02BORF17790P |
| 17795 | DNA-binding transcriptional regulator Fis | |||
| plasmid p1-S1-SRB-02-B | ||||
| 24525 | 97 aa hypothetical protein | |||
| 24530 | M | M.Xca80ORFEP (100% identity) | M.Eco02BORF24530P | |
| 24535 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11900 | GTPase | |||
| 11905 | R | EcosS1MrrP (100% identity) | Eco02BMrrP | |
| 11910 | type I restriction-modification system | |||