Escherichia coli S1-JOR-02-A |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli S1-JOR-02-A RM systems
Ref: Campos-Madueno,E.I. et al. unpublished
REBASE ref # 38392
Complete sequence: 5,325,307 bp
GenBank #: CP145634
REBASE acronym: EcoOR02A
Org_num: 76062
All begin V6S44_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 18200 | endoribonuclease SymE | |||
| 18205 | R | Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | EcoOR02AORF18215P |
| 18210 | S | S.Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | S.EcoOR02AORF18215P |
| 18215 | M | M.Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | M.EcoOR02AORF18215P |
| 18220 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3235 | 39 aa hypothetical protein | |||
| 3255 | M | M.Ecod58ORF7600P (100% identity) | A | M.EcoOR02AORF3255P |
| 3260 | TrmB family transcriptional regulator | |||
| 3865 | drug/metabolite exporter YedA | |||
| 3870 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoOR02ADcmP |
| 3875 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.EcoOR02ADcmP |
| 3880 | phosphohydrolase | |||
| 11575 | DNA-binding transcriptional regulator Fis | |||
| 11580 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.EcoOR02AORF11580P |
| 11585 | DUF2556 family protein | |||
| 12110 | ribulose-phosphate 3-epimerase | |||
| 12115 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoOR02ADamP |
| 12120 | cell division protein DamX | |||
| 24945 | PerC family transcriptional regulator | |||
| 24950 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoOR02AORF24950P |
| 24955 | LexA family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13705 | 176 aa hypothetical protein | |||
| 13710 | R | Eco5270ORF405P (100% identity) | GTCTC | EcoOR02AORF13715P |
| 13715 | M | M.EcosEC29ORF22195P (100% identity) | GTCTC | M.EcoOR02AORF13715P |
| 13720 | AIPR family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18215 | class I SAM-dependent DNA methyltransferase | |||
| 18220 | R | Ecost88MrrP (100% identity) | EcoOR02AMrrP | |
| 18225 | 34 aa hypothetical protein | |||
| 25155 | site-specific DNA recombinase | |||
| 25160 | R | EfeEF02ORF213200P (100% identity) | YCGR | EcoOR02AORF25160P |
| 25165 | isocitrate/isopropylmalate family dehydrogenase | |||