Escherichia coli S1-IND-01-B |
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Putative Escherichia coli S1-IND-01-B RM systems
Ref: Campos-Madueno,E.I. et al. unpublished
REBASE ref # 38392
| Sequence length: | GenBank #: | |
| Chromosome: | 4,954,538 bp | CP145655 |
| plasmid p1-S1-IND-01-B: | 140,349 bp | CP145656 |
REBASE acronym: Eco1B
Org_num: 76058
All begin V6S41_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 530 | transposase | |||
| 535 | R | EcosS3ORF12635P (100% identity) | Eco1BORF540P | |
| 540 | M | M.EcosS3ORF12635P (100% identity) | M.Eco1BORF540P | |
| 545 | S | S.EcosS3ORF12635P (100% identity) | S.Eco1BORF540P | |
| 550 | AAA family ATPase | |||
| 18690 | type IV toxin-antitoxin system AbiEi family | |||
| 18695 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco1BORF18700P |
| 18700 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco1BORF18700P |
| 18705 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco1BORF18700P |
| 18710 | 156 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2080 | cell division protein DamX | |||
| 2085 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1BDamP |
| 2090 | ribulose-phosphate 3-epimerase | |||
| 2680 | DUF2556 family protein | |||
| 2685 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco1BORF2685P |
| 2690 | DNA-binding transcriptional regulator Fis | |||
| 9080 | 67 aa hypothetical protein | |||
| 9085 | M | M.Sso63633ORF22290P (100% identity) | M.Eco1BORF9085P | |
| 9090 | phage lysis protein EssD | |||
| 10310 | phosphohydrolase | |||
| 10315 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco1BDcmP |
| 10320 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco1BDcmP |
| 10325 | drug/metabolite exporter YedA | |||
| 20625 | McrC family protein | |||
| 20630 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco1BORF20635P |
| 20635 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Eco1BORF20635P |
| 20640 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco1BORF20635P |
| 20645 | helix-turn-helix domain-containing protein | |||
| 20945 | response regulator receiver domain | |||
| 20950 | R | Ecos19ORF20635P (100% identity) | Eco1BORF20950P | |
| 20955 | 97 aa hypothetical protein | |||
| plasmid p1-S1-IND-01-B | ||||
| 24905 | 73 aa hypothetical protein | |||
| 24910 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco1BORF24910P |
| 24915 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20615 | glycosyltransferase family 2 protein | |||
| 20620 | R | EcosS3McrBP (100% identity) | Eco1BMcrBP | |
| 20625 | R | EcosS9McrCP (100% identity) | Eco1BMcrCP | |
| 20630 | Alw26I/Eco31I/Esp3I family type II restriction | |||