Escherichia coli S1-CAM-04-C |
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Putative Escherichia coli S1-CAM-04-C RM systems
Ref: Campos-Madueno,E.I. et al. unpublished
REBASE ref # 38392
Complete sequence: 5,291,651 bp
GenBank #: CP145703
REBASE acronym: Eco4C
Org_num: 76051
All begin V6S27_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4880 | restriction system-associated AAA family ATPase | |||
| 4885 | S | S.Sen64034II (100% identity) | AGCNNNNNCTTC | S.Eco4CORF4890P |
| 4890 | M | M.Sen64034II (100% identity) | AGCNNNNNCTTC | M.Eco4CORF4890P |
| 4895 | L,D-transpeptidase | |||
| 18400 | endoribonuclease SymE | |||
| 18405 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.Eco4CORF18410P |
| 18410 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.Eco4CORF18410P |
| 18415 | R | Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | Eco4CORF18410P |
| 18420 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4540 | drug/metabolite exporter YedA | |||
| 4545 | V | V.Ecostr9DcmP (74% identity) | CCWGG | V.Eco4CDcmP |
| 4550 | M | M.EcosE1DcmP (100% identity) | CCWGG | M.Eco4CDcmP |
| 4555 | phosphohydrolase | |||
| 7640 | PerC family transcriptional regulator | |||
| 7645 | M | M.Eco8450ORF4253P (100% identity) | M.Eco4CORF7645P | |
| 7650 | DUF1382 family protein | |||
| 8235 | DUF5405 family protein | |||
| 8240 | M | M.Eco6868ORF6430P (100% identity) | M.Eco4CORF8240P | |
| 8245 | replication endonuclease | |||
| 12260 | DNA-binding transcriptional regulator Fis | |||
| 12265 | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.Eco4CORF12265P |
| 12270 | DUF2556 family protein | |||
| 12790 | ribulose-phosphate 3-epimerase | |||
| 12795 | M | M.Ecos69DamP (100% identity) | GATC | M.Eco4CDamP |
| 12800 | cell division protein DamX | |||
| 25810 | recombination protein NinB | |||
| 25815 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco4CORF25815P |
| 25820 | NinE family protein | |||
| 26800 | TrmB family transcriptional regulator | |||
| 26805 | M | M.SflC32ORFBP (100% identity) | M.Eco4CORF26805P | |
| 26825 | tellurite resistance protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18390 | R | SenHNK130McrCP (100% identity) | Eco4CMcrCP | |
| 18395 | R | SenHNK130McrBP (100% identity) | Eco4CMcrBP | |
| 18400 | endoribonuclease SymE | |||
| 18415 | type I restriction-modification system | |||
| 18420 | R | Ssp28760MrrP (100% identity) | Eco4CMrrP | |
| 18425 | GTPase | |||