Escherichia coli S1-ZIM-01-A |
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Putative Escherichia coli S1-ZIM-01-A RM systems
Ref: Campos-Madueno,E.I. et al. unpublished
REBASE ref # 38392
| Sequence length: | GenBank #: | |
| Chromosome: | 5,177,482 bp | CP145671 |
| plasmid p1-S1-ZIM-01-A: | 166,858 bp | CP145672 |
| plasmid p3-S1-ZIM-01-A: | 85,155 bp | CP145674 |
REBASE acronym: EcoM01A
Org_num: 76071
All begin V6S34_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 690 | HTH-type transcriptional regulator Cbl | |||
| 695 | M | M.Sen64034II (100% identity) | AGCNNNNNCTTC | M.EcoM01AORF695P |
| 700 | S | S.Sen64034II (100% identity) | AGCNNNNNCTTC | S.EcoM01AORF695P |
| 705 | restriction system-associated AAA family ATPase | |||
| 12915 | adenine/cytosine-specific restriction | |||
| 12920 | R | Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | EcoM01AORF12925P |
| 12925 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.EcoM01AORF12925P |
| 12930 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.EcoM01AORF12925P |
| 12935 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1005 | phosphohydrolase | |||
| 1010 | M | M.EcosE1DcmP (100% identity) | CCWGG | M.EcoM01ADcmP |
| 1015 | V | V.Ecostr9DcmP (74% identity) | CCWGG | V.EcoM01ADcmP |
| 1020 | drug/metabolite exporter YedA | |||
| 4960 | DUF3927 family protein | |||
| 4975 | M | M.Sso1093ORF10290P (100% identity) | A | M.EcoM01AORF4975P |
| 4980 | TrmB family transcriptional regulator | |||
| 18355 | cell division protein DamX | |||
| 18360 | M | M.Ecos69DamP (100% identity) | GATC | M.EcoM01ADamP |
| 18365 | ribulose-phosphate 3-epimerase | |||
| plasmid p1-S1-ZIM-01-A | ||||
| 26150 | 73 aa hypothetical protein | |||
| 26155 | M | M.Ecowhn14ORF35P (100% identity) | M.EcoM01AORF26155P | |
| 26160 | 103 aa hypothetical protein | |||
| plasmid p3-S1-ZIM-01-A | ||||
| 26885 | 103 aa hypothetical protein | |||
| 26890 | M | M.Sso866ORF27155P (100% identity) | M.EcoM01AORF26890P | |
| 26895 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12910 | GTPase | |||
| 12915 | R | Ssp28760MrrP (100% identity) | EcoM01AMrrP | |
| 12920 | type I restriction-modification system | |||
| 12935 | endoribonuclease SymE | |||
| 12940 | R | SenHNK130McrBP (100% identity) | EcoM01AMcrBP | |
| 12945 | R | SenHNK130McrCP (100% identity) | EcoM01AMcrCP | |