Escherichia coli S1-KEN-05-A |
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Putative Escherichia coli S1-KEN-05-A RM systems
Ref: Campos-Madueno,E.I. et al. unpublished
REBASE ref # 38392
| Sequence length: | GenBank #: | |
| Chromosome: | 4,940,518 bp | CP145689 |
| plasmid p1-S1-KEN-05-A: | 117,860 bp | CP145690 |
REBASE acronym: Eco05A
Org_num: 76065
All begin V6S31_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18560 | type IV toxin-antitoxin system AbiEi family | |||
| 18565 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco05AORF18570P |
| 18570 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco05AORF18570P |
| 18575 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco05AORF18570P |
| 18580 | 156 aa hypothetical protein | |||
| plasmid p1-S1-KEN-05-A | ||||
| 24635 | IS1-like element IS1A family transposase | |||
| 24640 | S | S.SenceORFJP (11% identity) | S1.Eco05AORF24645P | |
| 24645 | M | M.SenceORFJP (99% identity) | M.Eco05AORF24645P | |
| 24650 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1705 | cell division protein DamX | |||
| 1710 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco05ADamP |
| 1715 | ribulose-phosphate 3-epimerase | |||
| 2305 | DUF2556 family protein | |||
| 2310 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco05AORF2310P |
| 2315 | DNA-binding transcriptional regulator Fis | |||
| 6100 | conjugal transfer protein TraD | |||
| 6105 | R | Sen7349IP (100% identity) | GAGCTC | Eco05AORF6110P |
| 6110 | M | M.Kpn8895III (100% identity) | GAGCTC | M.Eco05AORF6110P |
| 6115 | DUF3644 domain-containing protein | |||
| 6700 | serine/threonine protein phosphatase | |||
| 6705 | M | M.Esp911AORF3194P (100% identity) | GATC | M.Eco05AORF6705P |
| 6710 | PerC family transcriptional regulator | |||
| 10130 | phosphohydrolase | |||
| 10135 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco05ADcmP |
| 10140 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco05ADcmP |
| 10145 | drug/metabolite exporter YedA | |||
| 20495 | McrC family protein | |||
| 20500 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco05AORF20505P |
| 20505 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Eco05AORF20505P |
| 20510 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco05AORF20505P |
| 20515 | helix-turn-helix domain-containing protein | |||
| 20800 | response regulator receiver domain | |||
| 20805 | R | Ecos19ORF20635P (100% identity) | Eco05AORF20805P | |
| 20810 | 97 aa hypothetical protein | |||
| plasmid p1-S1-KEN-05-A | ||||
| 24575 | 73 aa hypothetical protein | |||
| 24580 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco05AORF24580P |
| 24585 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20485 | glycosyltransferase family 2 protein | |||
| 20490 | R | EcosS3McrBP (100% identity) | Eco05AMcrBP | |
| 20495 | R | EcosS9McrCP (100% identity) | Eco05AMcrCP | |
| 20500 | Alw26I/Eco31I/Esp3I family type II restriction | |||