Escherichia coli S1-IVC-02-A |
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Putative Escherichia coli S1-IVC-02-A RM systems
Ref: Campos-Madueno,E.I. et al. unpublished
REBASE ref # 38392
| Sequence length: | GenBank #: | |
| Chromosome: | 4,918,304 bp | CP145700 |
| plasmid p1-S1-IVC-02-A: | 109,837 bp | CP145699 |
REBASE acronym: EcoC02A
Org_num: 76061
All begin V6S28_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21855 | SIR2 family protein | |||
| 21860 | S | S.Ecoi68ORF3737P (98% identity) | GGANNNNNNCTTT | S.EcoC02AORF21865P |
| 21865 | M | M.Ecoi68ORF3737P (100% identity) | GGANNNNNNCTTT | M.EcoC02AORF21865P |
| 21870 | R | EcoFu014ORF1555P (100% identity) | GGANNNNNNCTTT | EcoC02AORF21865P |
| 21875 | IS3-like element IS3 family transposase | |||
| 22420 | IS3-like element ISSen4 family transposase | |||
| 22425 | R | EcotcmA3ORF16550P (100% identity) | EcoC02AORF22445P | |
| 22430 | DNA-processing protein DprA | |||
| 22435 | RecQ family ATP-dependent DNA helicase | |||
| 22440 | S | S.EcotcmA3ORF16550P (100% identity) | S.EcoC02AORF22445P | |
| 22445 | M | M.Pre393ORF2750P (100% identity) | M.EcoC02AORF22445P | |
| 22450 | helix-turn-helix domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2325 | cell division protein DamX | |||
| 2330 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC02ADamP |
| 2335 | ribulose-phosphate 3-epimerase | |||
| 2955 | DUF2556 family protein | |||
| 2960 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoC02AORF2960P |
| 2965 | DNA-binding transcriptional regulator Fis | |||
| 4640 | BREX-1 system phosphatase PglZ type A | |||
| 4645 | RM | EcoP19598ORF21290P (100% identity) | EcoC02AORF4645P | |
| 4650 | BREX system P-loop protein BrxC | |||
| 9965 | phosphohydrolase | |||
| 9970 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoC02ADcmP |
| 9975 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoC02ADcmP |
| 9980 | drug/metabolite exporter YedA | |||
| 13610 | DUF3927 family protein | |||
| 13625 | M | M.SsoCS14ORF10750P (100% identity) | A | M.EcoC02AORF13625P |
| 13630 | TrmB family transcriptional regulator | |||
| 18770 | zinc ribbon domain-containing protein | |||
| 18775 | M | M.EcosEC31ORF18555P (98% identity) | GGTACC | M.EcoC02AORF18775P |
| 18780 | integrase arm-type DNA-binding domain-containing | |||
| 21050 | 174 aa hypothetical protein | |||
| 21055 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.EcoC02AORF21055P |
| 21060 | ATP-binding protein | |||
| plasmid p1-S1-IVC-02-A | ||||
| 465 | 73 aa hypothetical protein | |||
| 470 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoC02AORF470P |
| 475 | 103 aa hypothetical protein | |||