Erwinia aphidicola B03_4 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Erwinia aphidicola B03_4 RM systems
Ref: Dougherty,P.E. unpublished
REBASE ref # 38257
Complete sequence: 4,610,687 bp
GenBank #: CP142333
REBASE acronym: EapB034
Org_num: 75874
All begin VRB58_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4845 | 113 aa hypothetical protein | |||
| 4850 | R | EapW038ORF4865P (100% identity) | EapB034ORF4855P | |
| 4855 | M | M.EapW038ORF4865P (100% identity) | M.EapB034ORF4855P | |
| 4860 | S | S.EapW038ORF4865P (100% identity) | S.EapB034ORF4855P | |
| 4865 | 55 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1475 | SPOR domain-containing protein | |||
| 1480 | M | M.EapW109DamP (100% identity) | M.EapB034DamP | |
| 1485 | ribulose-phosphate 3-epimerase | |||
| 6795 | TrmB family transcriptional regulator | |||
| 6800 | M | M.EapZ93ORF6335P (100% identity) | M.EapB034ORF6800P | |
| 6805 | phage holin, lambda family | |||
| 9105 | IS1 family transposase | |||
| 9110 | M | M.EapZ93ORF9075P (100% identity) | M.EapB034ORF9110P | |
| 9115 | tail fiber assembly protein | |||
| 11230 | AlpA family phage regulatory protein | |||
| 11235 | M | M1.EapW038ORF11240P (100% identity) | M1.EapB034ORF11235P | |
| 11240 | M | M2.EapW038ORF11240P (100% identity) | M2.EapB034ORF11235P | |
| 11245 | DNA cytosine methyltransferase | |||
| 11240 | phage N-6-adenine-methyltransferase | |||
| 11245 | M | M.EapW038ORF11250P (100% identity) | M.EapB034ORF11245P | |
| 11250 | 55 aa hypothetical protein | |||
| 12755 | drug/metabolite exporter YedA | |||
| 12760 | V | V.EapZ93ORF12725P (100% identity) | V.EapB034ORF12765P | |
| 12765 | M | M.EapW038ORF12770P (100% identity) | M.EapB034ORF12765P | |
| 12770 | methyl-accepting chemotaxis protein | |||
| 20270 | IS1 family transposase | |||
| 20275 | M | M.EapZ93ORF20125P (100% identity) | M.EapB034ORF20275P | |
| 20280 | IS66-like element accessory protein TnpA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2965 | integrase arm-type DNA-binding domain-containing | |||
| 2970 | M | M.EapZ93ORF2900P (100% identity) | M.EapB034ORF2970P | |
| 2975 | R | EapW111ORF2615P (100% identity) | EapB034ORF2970P | |
| 2980 | 269 aa hypothetical protein | |||