Erwinia aphidicola B04_3 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Erwinia aphidicola B04_3 RM systems
Ref: Dougherty,P.E. unpublished
REBASE ref # 38257
Complete sequence: 4,598,922 bp
GenBank #: CP142326
REBASE acronym: EapB043
Org_num: 75880
All begin VRB65_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1165 | SPOR domain-containing protein | |||
| 1170 | M | M.EapZ93DamP (100% identity) | M.EapB043DamP | |
| 1175 | ribulose-phosphate 3-epimerase | |||
| 6415 | TrmB family transcriptional regulator | |||
| 6420 | M | M.EapZ93ORF6335P (100% identity) | M.EapB043ORF6420P | |
| 6425 | phage holin, lambda family | |||
| 9145 | IS1 family transposase | |||
| 9150 | M | M.EapZ93ORF9075P (100% identity) | M.EapB043ORF9150P | |
| 9155 | tail fiber assembly protein | |||
| 12550 | drug/metabolite exporter YedA | |||
| 12555 | V | V.EapZ93ORF12725P (100% identity) | V.EapB043ORF12560P | |
| 12560 | M | M.EapW107ORF9255P (99% identity) | M.EapB043ORF12560P | |
| 12565 | methyl-accepting chemotaxis protein | |||
| 19700 | DUF2913 family protein | |||
| 19705 | R | EapW049ORF19740P (100% identity) | EapB043ORF19745P | |
| 19710 | transposase zinc-binding domain-containing | |||
| 19715 | transposase | |||
| 19720 | DUF1460 domain-containing protein | |||
| 19725 | SH3 domain-containing protein | |||
| 19730 | 235 aa hypothetical protein | |||
| 19735 | N-acetylmuramoyl-L-alanine amidase | |||
| 19740 | IS1 family transposase | |||
| 19745 | M | M.EapZ93ORF20125P (100% identity) | M.EapB043ORF19745P | |
| 19750 | IS66-like element accessory protein TnpA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2600 | integrase arm-type DNA-binding domain-containing | |||
| 2605 | M | M.EapZ93ORF2900P (100% identity) | M.EapB043ORF2605P | |
| 2610 | R | EapW111ORF2615P (100% identity) | EapB043ORF2605P | |
| 2615 | 269 aa hypothetical protein | |||
| 8210 | conjugal transfer protein TraD | |||
| 8215 | R | EapZ93ORF8155P (100% identity) | EapB043ORF8220P | |
| 8220 | M | M.EapZ93ORF8155P (100% identity) | M.EapB043ORF8220P | |
| 8225 | integrase arm-type DNA-binding domain-containing | |||