Lacticaseibacillus rhamnosus CP-1 |
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Putative Lacticaseibacillus rhamnosus CP-1 RM systems
Ref: Mao,Y. unpublished
REBASE ref # 38280
Complete sequence: 2,989,570 bp
GenBank #: CP144456
REBASE acronym: LrhCP
Org_num: 75492
All begin V1641_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9990 | 268 aa hypothetical protein | |||
| 9995 | S | S2.LrhY39IIIP (100% identity) | S2.LrhCPORF10010P | |
| 10000 | site-specific integrase | |||
| 10005 | S | S1.LrhsA5ORFBP (100% identity) | GGHANNNNNNCGT | S1.LrhCPORF10010P |
| 10010 | M | M.LrhsA5ORFBP (100% identity) | M.LrhCPORF10010P | |
| 10015 | R | LrhsA5ORFBP (100% identity) | LrhCPORF10010P | |
| 10020 | DUF998 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6045 | APC family permease | |||
| 6050 | M | M.LrhsA5ORFDP (100% identity) | M.LrhCPORF6050P | |
| 6055 | DUF1998 domain-containing protein | |||
| 9395 | DEAD/DEAH box helicase | |||
| 9400 | RM | LrhsA5ORFCP (100% identity) | CAGRAG | LrhCPORF9400P |
| 9405 | glutamine-hydrolyzing GMP synthase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9285 | helix-turn-helix transcriptional regulator | |||
| 9290 | R | LrhsA5MrrP (100% identity) | LrhCPMrrP | |
| 9295 | plasmid pRiA4b ORF-3 family protein | |||