Escherichia coli LTC201 |
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Putative Escherichia coli LTC201 RM systems
Ref: Umekage,S. unpublished
REBASE ref # 38214
Complete sequence: 5,128,278 bp
GenBank #: AP029249
REBASE acronym: EcoC201
Org_num: 75255
All begin LTC201_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 39970 | 388 aa hypothetical protein | |||
| 39980 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoC201ORF39980P |
| 39990 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoC201ORF39980P |
| 40000 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoC201ORF39980P |
| 40010 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4650 | multidrug efflux transporter transcriptional | |||
| 4660 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC201ORF4660P |
| 4670 | DNA-binding transcriptional regulator Fis | |||
| 18900 | phosphohydrolase | |||
| 18910 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoC201DcmP |
| 18920 | V | V.EcosC25DcmP (100% identity) | CCWGG | V.EcoC201DcmP |
| 18930 | drug/metabolite exporter YedA | |||
| 40660 | McrC family protein | |||
| 40670 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoC201ORF40680P |
| 40680 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoC201ORF40680P |
| 40690 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoC201ORF40680P |
| 40700 | 141 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 39960 | BrnT family toxin | |||
| 39970 | R | Ecou021MrrP (100% identity) | EcoC201MrrP | |
| 39980 | class I SAM-dependent DNA methyltransferase | |||
| 40640 | 218 aa hypothetical protein | |||
| 40650 | R | EcosS9McrBP (93% identity) | EcoC201McrBP | |
| 40660 | R | EcosS9McrCP (100% identity) | EcoC201McrCP | |
| 40670 | 579 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 26760 | DUF2591 family protein | |||
| 26770 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoC201ORF26770P |
| 26780 | recombination protein NinB | |||