Escherichia coli LTC101 |
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Putative Escherichia coli LTC101 RM systems
Ref: Umekage,S. unpublished
REBASE ref # 38214
Complete sequence: 5,131,721 bp
GenBank #: AP029248
REBASE acronym: EcoTC101
Org_num: 75254
All begin LTC101_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 40110 | 388 aa hypothetical protein | |||
| 40120 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoTC101ORF40120P |
| 40130 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoTC101ORF40120P |
| 40140 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoTC101ORF40120P |
| 40150 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4640 | multidrug efflux transporter transcriptional | |||
| 4650 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoTC101ORF4650P |
| 4660 | DNA-binding transcriptional regulator Fis | |||
| 18930 | phosphohydrolase | |||
| 18940 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoTC101DcmP |
| 18950 | V | V.EcosC25DcmP (100% identity) | CCWGG | V.EcoTC101DcmP |
| 18960 | drug/metabolite exporter YedA | |||
| 40790 | McrC family protein | |||
| 40800 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoTC101ORF40810P |
| 40810 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoTC101ORF40810P |
| 40820 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoTC101ORF40810P |
| 40830 | 141 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 40100 | BrnT family toxin | |||
| 40110 | R | Ecou021MrrP (100% identity) | EcoTC101MrrP | |
| 40120 | class I SAM-dependent DNA methyltransferase | |||
| 40770 | 218 aa hypothetical protein | |||
| 40780 | R | EcosS9McrBP (93% identity) | EcoTC101McrBP | |
| 40790 | R | EcosS9McrCP (100% identity) | EcoTC101McrCP | |
| 40800 | 579 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 26800 | DUF2591 family protein | |||
| 26810 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoTC101ORF26810P |
| 26820 | recombination protein NinB | |||