Pseudomonas putida MT178 |
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Putative Pseudomonas putida MT178 RM systems
Ref: Long,X. et al. unpublished
REBASE ref # 38318
| Sequence length: | GenBank #: | |
| Chromosome: | 5,857,371 bp | CP143524 |
| plasmid pTmex-577K: | 577,576 bp | CP143525 |
REBASE acronym: PpuMT178
Org_num: 75653
All begin V1687_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23730 | nuclease | |||
| 23735 | M | M.TspWB2ORF18655P (85% identity) | M.PpuMT178ORF23735P | |
| 23740 | S | S2.TspWB2ORF18655P (78% identity) | S.PpuMT178ORF23735P | |
| 23745 | FRG domain-containing protein | |||
| 23750 | R | AfeYQN3ORF13135P (86% identity) | PpuMT178ORF23735P | |
| 23755 | Ldh family oxidoreductase | |||
| plasmid pTmex-577K | ||||
| 29375 | recombinase family protein | |||
| 29380 | M | M.PspP16ORFEP (94% identity) | M.PpuMT178ORF29380P | |
| 29385 | S | S1.Psp11382ORF27470P (100% identity) | S1.PpuMT178ORF29380P | |
| 29390 | IS5-like element ISPa16 family transposase | |||
| 29395 | S | S2.Psp11382ORF27470P (100% identity) | S2.PpuMT178ORF29380P | |
| 29400 | 311 aa hypothetical protein | |||
| 29405 | R | PspP16ORFEP (100% identity) | PpuMT178ORF29380P | |
| 29410 | 263 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11545 | 162 aa hypothetical protein | |||
| 11550 | M | M.PpuSJTE1ORF9980P (97% identity) | M.PpuMT178ORF11550P | |
| 11555 | 205 aa hypothetical protein | |||
| 23275 | integrase arm-type DNA-binding domain-containing | |||
| 23280 | RM | Ppu01ORF44120P (100% identity) | PpuMT178ORF23280P | |
| 23285 | AlpA family transcriptional regulator | |||