Xanthomonas campestris pv. barbareae NCPPB 983 |
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Putative Xanthomonas campestris pv. barbareae NCPPB 983 RM systems
Ref: Hussain,R.M.F. et al. unpublished
REBASE ref # 38361
Complete sequence: 5,060,413 bp
GenBank #: CP142005
REBASE acronym: Xca983
Org_num: 75852
All begin LLE68_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6220 | SprT family zinc-dependent metalloprotease | |||
| 6225 | R | Xca8305ORF6290P (100% identity) | Xca983ORF6240P | |
| 6230 | S | S2.Xca8305ORF6290P (100% identity) | S3.Xca983ORF6240P | |
| 6235 | virulence RhuM family protein | |||
| 6240 | M | M.Xca8305ORF6290P (100% identity) | M.Xca983ORF6240P | |
| 6245 | S | S1.Xca8305ORF6290P (100% identity) | S1.Xca983ORF6240P | |
| ??? | S | S2.Xho22331ORF6735P (68% identity) | S2.Xca983ORF6240P | |
| 6255 | type III secretion system effector XopK | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2970 | pyruvate dehydrogenase (acetyl-transferring), | |||
| 2975 | M | M.Msp3009ORFCP (58% identity) | M.Xca983ORF2975P | |
| 2980 | R | Msp3009ORFCP (44% identity) | Xca983ORF2975P | |
| 2985 | transposase | |||
| 8545 | phage portal protein | |||
| 8555 | M | M.Xho2044ORF24960P (100% identity) | M.Xca983ORF8555P | |
| 8560 | 345 aa hypothetical protein | |||
| 19455 | XVIPCD domain-containing protein | |||
| 19460 | M | M.Xca662ORF19235P (100% identity) | M.Xca983ORF19460P | |
| 19465 | R | R1.Xca662ORF19235P (100% identity) | R1.Xca983ORF19460P | |
| 19470 | R | R1.Xca5057ORF2800P (100% identity) | R2.Xca983ORF19460P | |
| 19475 | 273 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16170 | UvrD-helicase domain-containing protein | |||
| 16175 | M | M.Xca814ORF6265P (95% identity) | M.Xca983ORF16175P | |
| 16180 | R | XcaXY11ORF15915P (98% identity) | Xca983ORF16175P | |
| 16185 | type II toxin-antitoxin system RelE/ParE family | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7085 | 98 aa hypothetical protein | |||
| 7090 | R | Xca5824McrBP (100% identity) | Xca983McrBP | |
| 7095 | R | XcaCN13aMcrCP (98% identity) | Xca983McrCP | |
| 7100 | 44 aa hypothetical protein | |||
| 21960 | alpha/beta fold hydrolase | |||
| 21965 | R | XcaCN16Mrr3P (78% identity) | Xca983MrrP | |
| 21970 | 204 aa hypothetical protein | |||