Escherichia coli muskdeer13-4 |
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Putative Escherichia coli muskdeer13-4 RM systems
Ref: Zhong,Z. unpublished
REBASE ref # 38260
| Sequence length: | GenBank #: | |
| Chromosome: | 5,098,159 bp | CP128596 |
| plasmid pLS149-1: | 235,243 bp | CP128597 |
REBASE acronym: Ecor134
Org_num: 75412
All begin OR232_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20795 | restriction endonuclease | |||
| 20800 | M | M.EcosA4II (100% identity) | GATANNNNNNTCC | M.Ecor134ORF20800P |
| 20805 | S | S.EcosA4II (100% identity) | GATANNNNNNTCC | S.Ecor134ORF20800P |
| 20810 | R | EcosA4IIP (100% identity) | GATANNNNNNTCC | Ecor134ORF20800P |
| 20815 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1635 | cell division protein DamX | |||
| 1640 | M | M.SspPIBDamP (100% identity) | GATC | M.Ecor134DamP |
| 1645 | ribulose-phosphate 3-epimerase | |||
| 2235 | DUF2556 family protein | |||
| 2240 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Ecor134ORF2240P |
| 2245 | DNA-binding transcriptional regulator Fis | |||
| 10110 | phosphohydrolase | |||
| 10115 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Ecor134DcmP |
| 10120 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Ecor134DcmP |
| 10125 | drug/metabolite exporter YedA | |||
| 15970 | replication endonuclease | |||
| 15975 | M | M.Eco3066ORF29710P (100% identity) | GATC | M.Ecor134ORF15975P |
| 15980 | DUF3850 domain-containing protein | |||
| plasmid pLS149-1 | ||||
| 24550 | 48 aa hypothetical protein | |||
| 24555 | M | M.YpsF1ORFBP (41% identity) | M.Ecor134ORF24555P | |
| 24560 | 42 aa hypothetical protein | |||
| 24740 | 277 aa hypothetical protein | |||
| 24745 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Ecor134ORF24745P |
| 24750 | DNA-binding protein | |||
| 25265 | 55 aa hypothetical protein | |||
| 25270 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Ecor134ORF25270P |
| 25275 | thermonuclease family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20790 | BrnT family toxin | |||
| 20795 | R | EcosA4MrrP (100% identity) | Ecor134MrrP | |
| 20800 | class I SAM-dependent DNA methyltransferase | |||