Xanthomonas campestris pv. campestris WHRI 6066 |
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Putative Xanthomonas campestris pv. campestris WHRI 6066 RM systems
Ref: Hussain,R.M.F. et al. unpublished
REBASE ref # 38361
Complete sequence: 5,022,730 bp
GenBank #: CP142085
REBASE acronym: Xca6066
Org_num: 75855
All begin VDP59_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6180 | SprT family zinc-dependent metalloprotease | |||
| 6185 | R | Xca12825ORF6625P (100% identity) | Xca6066ORF6205P | |
| 6190 | S | S.XcaCN18ORFCP (100% identity) | S.Xca6066ORF6205P | |
| 6195 | RhuM family protein | |||
| 6200 | damage-inducible protein D | |||
| 6205 | M | M.Xcacc2ORF6130P (100% identity) | M.Xca6066ORF6205P | |
| 6210 | restriction endonuclease subunit S | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3050 | pyruvate dehydrogenase (acetyl-transferring), | |||
| 3055 | M | M.Xca6056ORF3045AP (100% identity) | M.Xca6066ORF3055AP | |
| 3060 | M | M.Xca6056ORF3045BP (78% identity) | M.Xca6066ORF3055BP | |
| 3065 | AAA family ATPase | |||
| 5225 | XVIPCD domain-containing protein | |||
| 5230 | RM | Xca6056ORF5195AP (92% identity) | Xca6066ORF5230AP | |
| 5235 | IS3-like element IS476 family transposase | |||
| 5240 | RM | Xca6056ORF5195BP (80% identity) | Xca6066ORF5230BP | |
| 5250 | GIY-YIG nuclease family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3060 | DNA cytosine methyltransferase | |||
| 3065 | R | Xca6066McrB3P (100% identity) | Xca6066McrBP | |
| 3070 | R | Xca6066McrC3P (100% identity) | Xca6066McrCP | |
| 3075 | transposase | |||
| 3060 | DNA cytosine methyltransferase | |||
| 3065 | R | Xca6066McrB3P (100% identity) | Xca6066McrB2P | |
| 3070 | R | Xca6066McrC3P (100% identity) | Xca6066McrC2P | |
| 3075 | transposase | |||
| 3060 | DNA cytosine methyltransferase | |||
| 3065 | R | Xca6066McrB2P (100% identity) | Xca6066McrB3P | |
| 3070 | R | Xca6066McrC2P (100% identity) | Xca6066McrC3P | |
| 3075 | transposase | |||
| 13050 | IS3 family transposase | |||
| 13055 | R | Xca6056MrrP (100% identity) | Xca6066MrrP | |
| 13060 | NYN domain-containing protein | |||
| 16170 | class I SAM-dependent DNA methyltransferase | |||
| 16175 | R | Xca6056Mrr2P (100% identity) | Xca6066Mrr2P | |
| 16180 | type II toxin-antitoxin system RelE/ParE family | |||
| 22085 | RluA family pseudouridine synthase | |||
| 22090 | R | Xca6066Mrr4P (100% identity) | Xca6066Mrr3P | |
| 22095 | peptidoglycan-binding domain-containing protein | |||
| 22085 | RluA family pseudouridine synthase | |||
| 22090 | R | Xca6066Mrr3P (100% identity) | Xca6066Mrr4P | |
| 22095 | peptidoglycan-binding domain-containing protein | |||