Escherichia coli Case 2 |
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Putative Escherichia coli Case 2 RM systems
Ref: Hans,J.B. unpublished
REBASE ref # 38132
Complete sequence: 4,745,910 bp
GenBank #: CP142438
REBASE acronym: EcoCase2
Org_num: 74031
All begin VUP55_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 395 | sce7726 family protein | |||
| 400 | R | EcoCase6ORF480P (100% identity) | CAAYNNNNNCTGC | EcoCase2ORF405P |
| 405 | M | M.SflN116ORF3940P (100% identity) | CAAYNNNNNCTGC | M.EcoCase2ORF405P |
| 410 | S | S.SflN116ORF3940P (100% identity) | CAAYNNNNNCTGC | S.EcoCase2ORF405P |
| 415 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2055 | cell division protein DamX | |||
| 2060 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoCase2DamP |
| 2065 | ribulose-phosphate 3-epimerase | |||
| 9250 | phosphohydrolase | |||
| 9255 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.EcoCase2DcmP |
| 9260 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.EcoCase2DcmP |
| 9265 | drug/metabolite exporter YedA | |||
| 11230 | DUF977 family protein | |||
| 11235 | M | M.SsoSE61ORF20220P (100% identity) | M.EcoCase2ORF11235P | |
| 11240 | 60 aa hypothetical protein | |||
| 15085 | phosphoadenosine phosphosulfate reductase family | |||
| ??? | M | M.Eco4390ORFEP (100% identity) | M.EcoCase2ORF15090P | |
| 15095 | TraR/DksA family transcriptional regulator | |||
| 19895 | HNH endonuclease | |||
| 19900 | R | Sso8ORF19860P (100% identity) | EcoCase2ORF19900P | |
| 19905 | 100 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19905 | 100 aa hypothetical protein | |||
| 19910 | R | SflN116ORF19490P (100% identity) | EcoCase2ORF19915P | |
| 19915 | M | M.SflN116ORF19490P (93% identity) | M.EcoCase2ORF19915P | |
| 19920 | IS3-like element ISEc52 family transposase | |||