Escherichia coli HS1496 |
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Putative Escherichia coli HS1496 RM systems
Ref: Jiang,X. et al. Antimicrob Agents Chemother (2024) In press
REBASE ref # 38136
| Sequence length: | GenBank #: | |
| Chromosome: | 5,227,706 bp | CP142382 |
| plasmid pHS1496_1: | 167,321 bp | CP142383 |
| plasmid pHS1496_3: | 65,090 bp | CP142385 |
| plasmid pHS1496_KPC: | 165,246 bp | CP142384 |
REBASE acronym: Eco496
Org_num: 74059
All begin VJW35_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19605 | type IV toxin-antitoxin system AbiEi family | |||
| 19610 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco496ORF19615P |
| 19615 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco496ORF19615P |
| 19620 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco496ORF19615P |
| 19625 | 156 aa hypothetical protein | |||
| 21430 | restriction endonuclease | |||
| 21435 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco496ORF21435P |
| 21440 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco496ORF21435P |
| 21445 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Eco496ORF21435P |
| 21450 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1695 | cell division protein DamX | |||
| 1700 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco496DamP |
| 1705 | ribulose-phosphate 3-epimerase | |||
| 9870 | phosphohydrolase | |||
| 9875 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco496DcmP |
| 9880 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco496DcmP |
| 9885 | drug/metabolite exporter YedA | |||
| 10765 | antiterminator Q family protein | |||
| 10770 | M | M2.EcosS3ORF2905P (100% identity) | GTCGAC | M1.Eco496ORF10770P |
| 10775 | R | R2.EcosS3ORF2905P (100% identity) | GTCGAC | R1.Eco496ORF10770P |
| 10780 | R | R1.EcosS3ORF2905P (100% identity) | GTCGAC | R2.Eco496ORF10770P |
| 10785 | TrmB family transcriptional regulator | |||
| 10790 | M | M1.EcosS3ORF2905P (100% identity) | M2.Eco496ORF10770P | |
| 10795 | DUF6645 domain-containing protein | |||
| 13800 | DUF3927 family protein | |||
| 13815 | M | M.EcosS9ORF10680P (100% identity) | A | M.Eco496ORF13815P |
| 13820 | TrmB family transcriptional regulator | |||
| 16085 | helix-turn-helix transcriptional regulator | |||
| 16090 | M | M.KpnYN1ORFGP (89% identity) | M.Eco496ORF16090P | |
| 16095 | 71 aa hypothetical protein | |||
| 21790 | McrC family protein | |||
| 21795 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco496ORF21800P |
| 21800 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Eco496ORF21800P |
| 21805 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco496ORF21800P |
| 21810 | helix-turn-helix domain-containing protein | |||
| 23095 | response regulator receiver domain | |||
| 23100 | R | EcosS3ORF15775P (100% identity) | Eco496ORF23105P | |
| 23105 | M | M.EcosS3ORF15775P (100% identity) | M.Eco496ORF23105P | |
| 23110 | conjugal transfer protein TraG N-terminal | |||
| plasmid pHS1496_1 | ||||
| 26790 | 73 aa hypothetical protein | |||
| 26795 | M | M.KpnVA569ORF28145P (100% identity) | M.Eco496ORF26795P | |
| 26800 | 103 aa hypothetical protein | |||
| plasmid pHS1496_3 | ||||
| 28225 | 73 aa hypothetical protein | |||
| 28230 | M | M.Xca80ORFEP (100% identity) | M.Eco496ORF28230P | |
| 28235 | 97 aa hypothetical protein | |||
| plasmid pHS1496_KPC | ||||
| 27580 | IS3 family transposase | |||
| 27585 | M | M.YrupYR1ORFCP (93% identity) | M.Eco496ORF27585P | |
| 27590 | 143 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21425 | BrnT family toxin | |||
| 21430 | R | Ecou021MrrP (100% identity) | Eco496MrrP | |
| 21435 | class I SAM-dependent DNA methyltransferase | |||