Escherichia coli ExPEC_A412 |
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Putative Escherichia coli ExPEC_A412 RM systems
Ref: Li,X. et al. unpublished
REBASE ref # 38134
| Sequence length: | GenBank #: | |
| Chromosome: | 4,819,517 bp | CP142543 |
| plasmid pA412_p0: | 251,777 bp | CP142544 |
REBASE acronym: EcoA412
Org_num: 74049
All begin SNB95_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3075 | 428 aa hypothetical protein | |||
| 3080 | S | S.EcosC41ORF5210P (98% identity) | GCAGNNNNNTGT | S.EcoA412ORF3085P |
| 3085 | M | M.EcosC41ORF5210P (100% identity) | GCAGNNNNNTGT | M.EcoA412ORF3085P |
| 3090 | 128 aa hypothetical protein | |||
| 8075 | IS3 family transposase | |||
| 8080 | S | S.EcoVA2ORFHP (56% identity) | S2.EcoA412ORF8110P | |
| 8085 | IS5-like element ISKpn26 family transposase | |||
| 8090 | IS256 family transposase | |||
| 8095 | polysaccharide pyruvyl transferase family | |||
| 8100 | glycosyltransferase | |||
| ??? | S | S1.Eco74ORF14890P (100% identity) | S1.EcoA412ORF8110P | |
| 8110 | M | M.EcosEC21ORF13545P (100% identity) | M.EcoA412ORF8110P | |
| 8115 | GTPase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2725 | integrase | |||
| 2730 | R | SflFF24DptFP (100% identity) | EcoA412DptFP | |
| 2735 | DNA phosphorothioation-dependent restriction | |||
| 2730 | DNA phosphorothioation-dependent restriction | |||
| 2735 | R | SflFF24DptGP (100% identity) | EcoA412DptGP | |
| 2740 | DNA phosphorothioation-dependent restriction | |||
| 2735 | DNA phosphorothioation-dependent restriction | |||
| 2740 | R | EcosEC5DptHP (100% identity) | EcoA412DptHP | |
| 2745 | accessory gene regulator B family protein | |||
| 2755 | DGQHR domain-containing protein | |||
| 2760 | M | M.SflFF24DndEP (100% identity) | M.EcoA412DndEP | |
| 2765 | DNA sulfur modification protein DndD | |||
| 2760 | DNA sulfur modification protein DndE | |||
| 2765 | M | M.Econumer3DndDP (100% identity) | M.EcoA412DndDP | |
| 2770 | DNA phosphorothioation system sulfurtransferase | |||
| 2765 | DNA sulfur modification protein DndD | |||
| 2770 | M | M.SflFF24DndCP (100% identity) | M.EcoA412DndCP | |
| 2775 | DNA sulfur modification protein DndB | |||
| 2770 | DNA phosphorothioation system sulfurtransferase | |||
| 2775 | M | M.SflFF24DndBP (100% identity) | M.EcoA412DndBP | |
| 2780 | osmoprotectant transport activator ProQ | |||
| 3100 | AAA family ATPase | |||
| 3105 | R | EcosC41ORF5230P (100% identity) | EcoA412ORF3105P | |
| 3110 | HNH endonuclease | |||
| 13640 | drug/metabolite exporter YedA | |||
| 13645 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoA412DcmP |
| 13650 | M | M.SspS13DcmP (99% identity) | CCWGG | M.EcoA412DcmP |
| 13655 | phosphohydrolase | |||
| 21180 | ribulose-phosphate 3-epimerase | |||
| 21185 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoA412DamP |
| 21190 | cell division protein DamX | |||
| plasmid pA412_p0 | ||||
| 23195 | thermonuclease family protein | |||
| 23200 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.EcoA412ORF23200P |
| 23205 | 55 aa hypothetical protein | |||
| 23745 | 284 aa hypothetical protein | |||
| 23750 | M | M.YpsF1ORFDP (95% identity) | M.EcoA412ORF23750P | |
| 23755 | DNA-binding protein | |||
| 23865 | 202 aa hypothetical protein | |||
| 23870 | M | M.YpsF1ORFBP (100% identity) | M.EcoA412ORF23870P | |
| 23875 | 48 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3090 | 128 aa hypothetical protein | |||
| 3095 | R | Ecows53McrCP (100% identity) | EcoA412McrCP | |
| 3100 | R | SflN101McrBP (100% identity) | EcoA412McrBP | |
| 3105 | HNH endonuclease | |||
| 5010 | IS5-like element ISKpn26 family transposase | |||
| 5015 | R | SflN97McrBP (87% identity) | EcoA412McrB2P | |
| 5020 | R | SflN97McrCP (100% identity) | EcoA412McrC2P | |
| 5025 | IS5-like element IS903B family transposase | |||