Escherichia coli ExPEC_A430 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli ExPEC_A430 RM systems
Ref: Li,X. et al. unpublished
REBASE ref # 38134
| Sequence length: | GenBank #: | |
| Chromosome: | 4,768,728 bp | CP142540 |
| plasmid pA430_p0: | 122,597 bp | CP142541 |
REBASE acronym: EcoA430
Org_num: 74050
All begin SNC55_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16970 | integrase core domain-containing protein | |||
| 16975 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.EcoA430ORF16975P |
| 16980 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.EcoA430ORF16975P |
| 16985 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | EcoA430ORF16975P |
| 16990 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5790 | TrmB family transcriptional regulator | |||
| 5795 | M | M.EcosE1ORFAP (100% identity) | M.EcoA430ORF5795P | |
| 5800 | 63 aa hypothetical protein | |||
| 13465 | drug/metabolite exporter YedA | |||
| 13470 | V | V.EcosEC71DcmP (100% identity) | V.EcoA430DcmP | |
| 13475 | M | M.EcosEC71DcmP (100% identity) | CCWGG | M.EcoA430DcmP |
| 13480 | phosphohydrolase | |||
| 20805 | ribulose-phosphate 3-epimerase | |||
| 20810 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoA430DamP |
| 20815 | cell division protein DamX | |||
| plasmid pA430_p0 | ||||
| 23720 | 103 aa hypothetical protein | |||
| 23725 | M | M.Sso8ORF23800P (100% identity) | SAY | M.EcoA430ORF23725P |
| 23730 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9415 | recombinase family protein | |||
| 9420 | R | EcoteDMcrBP (100% identity) | EcoA430McrBP | |
| 9425 | R | EmaE2C08McrCP (100% identity) | EcoA430McrCP | |
| 9430 | isocitrate/isopropylmalate family dehydrogenase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7645 | TraR/DksA family transcriptional regulator | |||
| 7650 | M | M.Sen663ORF16605P (100% identity) | GATC | M.EcoA430ORF7650P |
| 7655 | replication endonuclease | |||